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This is the conversion of the BICF RNASeq pipeline into the nextflow framework.
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An example workflow package for the BioHPC Astrocyte workflow engine.
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An example workflow package for the BioHPC Astrocyte workflow engine.
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This project is the astrocyte project to do variant analysis with BAMs generated in the RNASeq Differential expression analysis pipeline.
Topics: RNASeq NGSUpdated -
This project is the astrocyte project to do variant analysis with BAMs generated in the RNASeq Differential expression analysis pipeline.
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GCRB / gcrb_atacseq_web
OtherAn example of ATAC-seq using BioHPC Astrocyte workflow engine.
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Strand Lab / sc-TissueMapper_Pr
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Multiple Fisher's exact tests for differential alternative splicing detection using RNA-seq data
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BICF / Astrocyte / cellranger_count
MIT LicenseUpdated -
Strand Lab / sc-TissueMapper
MIT LicenseUpdated -
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GUDMAP_RBK / RNA-seq
MIT LicenseUpdated