Explore projects

An example workflow package for the BioHPC Astrocyte workflow engine.

A general purpose Astrocyte workflow to run quality control on single cell RNA sequencing data.

Source codes to perform simulations of microtubule growth. Cleary et al. 2022, Elife, "Measurements and simulations of microtubule growth imply strong longitudinal interactions and reveal a role for GDP on the elongating end".

R code for subsample correlation analysis as used in Thody et al. 2022.

3 month training notes/walkthrough of excersises

Program that overlays MEG dipoles onto MRI images and provides region highlighting to show where the dipoles are located.

The runner for cutandrun

A Flywheel gear to import MEG metadata from files

Notebooks and scripts provided here can be used for analyzing data files generated by Tecan and Biotek plate readers.

This is the code repository for the manuscript "Characterization of Demographical Histologic Diversity in Small Renal Masses with the Clear Cell Likelihood Score"

cutandrun pipeline from https://github.com/nf-core/cutandrun

This is the code repository for the manuscript "Characterization of Demographical Histologic Diversity in Small Renal Masses with the Clear Cell Likelihood Score"