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This repository contains scripts for ChIP-seq and RNA-seq analysis used in ARF paper
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FLywheel Gearification of https://gitlab.com/Michael_Paris/AutoMATiCA/
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Felix Perez / astrocyte-atac-runner
MIT LicenseUpdated -
BFei's student group project placenta segmentator
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Files from the Advanced Concepts of Deep Learning Nanocourse
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Transcript Analyzer is a module that aids in looking at and identifying target phrases in transcripts. There are two main files ProbTimeSeries.py and TranscriptAnalyzer.py the latter of which uses Streamlit to create an app
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Felix Perez / chipseq_analysis_containerized
MIT LicenseUpdated -
Gearification of Sybil Lung Cancer Risk Prediction (https://github.com/reginabarzilaygroup/Sybil)
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AI segmentation for axial T2W MR Autosomal Dominant Polycystic Kidney Disease (https://github.com/aksg87/adpkd-segmentation-pytorch)
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Ahmed Abbas / ChIPr
OtherThree variants of regression models based on deep neural networks, random forest, and gradient boosting to predict chromatin interaction strength.
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Astrocyte / Workflows / ENCODE / atac-seq_runner
MIT LicenseUpdated -
Lei Xiao / DA2Song
BSD 3-Clause "New" or "Revised" LicenseUpdated -
BioHPC / biohpc_flash_community
GNU General Public License v3.0 or laterThe flash-community FTP project allows users to share their files with guests.
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This is a set of python and R routines for converting imaging and mask information to radiomic features and perform simple classification task.
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Yusuf Talha Tamer / generalizedLotkaVolterra
MIT LicenseThis repo is designed to provide a set of scripts that models microbial communities using generalized Lotka-Volterra equations.
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BICF / Astrocyte / cellranger_mkfastq
MIT LicenseUpdated -
BICF / Astrocyte / DAStk_modified
BSD 3-Clause "New" or "Revised" LicenseUpdated