Explore projects

Parameter exploration job runner for the BioHPC nucleus cluster.

PyTorch code and models for the DINOv2 self-supervised learning method.

Analysis scripts for projects related to germ cell tumors.

Generate flow-rate gradients with Fluigent microfluidic pumps.

This repository contains scripts for ChIP-seq and RNA-seq analysis used in ARF paper

FLywheel Gearification of https://gitlab.com/Michael_Paris/AutoMATiCA/

BFei's student group project placenta segmentator

Files from the Advanced Concepts of Deep Learning Nanocourse

Transcript Analyzer is a module that aids in looking at and identifying target phrases in transcripts. There are two main files ProbTimeSeries.py and TranscriptAnalyzer.py the latter of which uses Streamlit to create an app

Gearification of Sybil Lung Cancer Risk Prediction (https://github.com/reginabarzilaygroup/Sybil)

AI segmentation for axial T2W MR Autosomal Dominant Polycystic Kidney Disease (https://github.com/aksg87/adpkd-segmentation-pytorch)