Commits · master · Strand Lab / sc-TissueMapper

14 May, 2020 3 commits
- Fix conflicts · 5519c8d4
  Gervaise H. Henry authored May 14, 2020
  
  5519c8d4
- Update README.md · 3d251e18
  Gervaise H. Henry authored May 14, 2020
  
  3d251e18
- Add LICENSE · 57f78d05
  Gervaise H. Henry authored May 14, 2020
  
  57f78d05
12 May, 2020 1 commit
- Calculate DEGs with hu Urethra merged · d0b0d4e5
  Gervaise H. Henry authored May 12, 2020
  
  d0b0d4e5
11 May, 2020 1 commit
- Update muPrUr diy · ce20676a
  Gervaise H. Henry authored May 11, 2020
  
  ce20676a
09 May, 2020 1 commit
- Fix diy ident group names · 433f0000
  Gervaise H. Henry authored May 09, 2020
  
  433f0000
02 Mar, 2020 2 commits
- Add huBl to bash run singler · 32307ec8
  Gervaise H. Henry authored Mar 02, 2020
  
  32307ec8
- Add iPS to hu fmst · a0656c51
  Gervaise H. Henry authored Mar 02, 2020
  
  a0656c51
25 Feb, 2020 6 commits
- Update README.md · 2fcf9963
  Gervaise H. Henry authored Feb 25, 2020
  
  2fcf9963
- Update LICENSE · e1852ac3
  Gervaise H. Henry authored Feb 25, 2020
  
  e1852ac3
- Add new License · a11ecd0f
  Gervaise H. Henry authored Feb 25, 2020
  
  a11ecd0f
- Merge branch 'develop' into 'master' · 07b90de0
  Gervaise H. Henry authored Feb 25, 2020
```
Develop

See merge request !3
```
  07b90de0
- Merge branch 'Seurat3.0' into 'develop' · 545cc57e
  Gervaise H. Henry authored Feb 25, 2020
```
Seurat3.0

See merge request !2
```
  545cc57e
- Add Pd deep epi ID to genesets · 801bdaa5
  Gervaise H. Henry authored Feb 25, 2020
  
  801bdaa5
23 Feb, 2020 1 commit
- Add Krt19 to muPrUr diy · 4b0b5d50
  Gervaise H. Henry authored Feb 23, 2020
  
  4b0b5d50
18 Feb, 2020 2 commits
- Cell Type deg · a4d82de1
  Gervaise H. Henry authored Feb 18, 2020
  
  a4d82de1
- Add NE feature plots to diy · 5718fa8f
  Gervaise H. Henry authored Feb 18, 2020
  
  5718fa8f
17 Feb, 2020 5 commits
- Fix mu diy · 08ca3d3e
  Gervaise H. Henry authored Feb 17, 2020
  
  08ca3d3e
- Lower res of mu lin · 6c9a18a2
  Gervaise H. Henry authored Feb 17, 2020
  
  6c9a18a2
- Fix mus diy · c3c4c921
  Gervaise H. Henry authored Feb 17, 2020
  
  c3c4c921
- Update PdPgb diy · 34fcd4b2
  Gervaise H. Henry authored Feb 17, 2020
  
  34fcd4b2
- Make lin singler use fine labels · 5917f086
  Gervaise H. Henry authored Feb 17, 2020
  
  5917f086
16 Feb, 2020 5 commits
- Use res 5 for lin in hu mu singelr · c8ee0098
  Gervaise H. Henry authored Feb 16, 2020
  
  c8ee0098
- Change singler to res 5 and fine · af6cb761
  Gervaise H. Henry authored Feb 16, 2020
  
  af6cb761
- Change threshold code to match qc thresh · dbb4d204
  Gervaise H. Henry authored Feb 16, 2020
  
  dbb4d204
- Add newest version (GRCm38.p6) of hu/mu orthology · 7e720ca8
  Gervaise H. Henry authored Feb 16, 2020
  
  7e720ca8
- Fix QC filter · 447e05b8
  Gervaise H. Henry authored Feb 16, 2020
  
  447e05b8
10 Feb, 2020 4 commits
- Replace pr sub plot for mu · 46b71b47
  Gervaise H. Henry authored Feb 10, 2020
  
  46b71b47
- Handle removed Tz cells from cust corr heatmap · 950b88d0
  Gervaise H. Henry authored Feb 10, 2020
  
  950b88d0
- Replace heatmap code which was accidentally removed · 069373dc
  Gervaise H. Henry authored Feb 10, 2020
  
  069373dc
- Fix row order for custom score heatmap · 49153fc7
  Gervaise H. Henry authored Feb 10, 2020
  
  49153fc7
08 Feb, 2020 2 commits
- Add back all code in RUN · 5e9fc82b
  Gervaise H. Henry authored Feb 08, 2020
  
  5e9fc82b
- Add NE and QuSAGE to mus DIY · d37d5534
  Gervaise H. Henry authored Feb 08, 2020
  
  d37d5534
05 Feb, 2020 1 commit
- Add hupop figs to mus diy · af3ad249
  Gervaise H. Henry authored Feb 05, 2020
  
  af3ad249
04 Feb, 2020 4 commits
- Remove unnecesary rownames from PdPgb diy degs · 266a45c8
  Gervaise H. Henry authored Feb 04, 2020
  
  266a45c8
- Remove Donor Tz from analysis and add DEG between Pd-Tz and Pgb · 1722636e
  Gervaise H. Henry authored Feb 04, 2020
  
  1722636e
- Remove stragler excluded BPH sample · 128d5c8c
  Gervaise H. Henry authored Feb 04, 2020
  
  128d5c8c
- Fix bash if · 76260877
  Gervaise H. Henry authored Feb 04, 2020
  
  76260877
03 Feb, 2020 2 commits
- Fix human corr axes labels · fa7e8908
  Gervaise H. Henry authored Feb 03, 2020
  
  fa7e8908
- Add custom coor plots for PdPgb · a7e3307e
  Gervaise H. Henry authored Feb 03, 2020
  
  a7e3307e