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Commit f83b35f5 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Remove IsoModes from thresh

parent f681be71
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2 merge requests!6Develop,!5Refactor
......@@ -420,7 +420,7 @@ scThresh <- function(sc10x,feature,sub=FALSE){
thresh <-list()
cutoff.l <- list()
cutoff.h <- list()
thresh_methods <- c("IJDefault","Huang","Huang2","IsoData","Li","Mean","MinErrorI","Moments","Otsu","Percentile","RenyiEntropy","Shanbhag","Triangle")#,"Intermodes"
thresh_methods <- c("IJDefault","Huang","Huang2","Li","Mean","MinErrorI","Moments","Otsu","Percentile","RenyiEntropy","Shanbhag","Triangle")#,"Intermodes","IsoData"
for (i in names(sc10x)){
scale[[i]] <- data.frame(Score=sc10x[[i]][[feature]])
colnames(scale[[i]]) <- "Score"
......
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