Commit f83b35f5 authored by Gervaise Henry's avatar Gervaise Henry 🤠
Browse files

Remove IsoModes from thresh

parent f681be71
......@@ -420,7 +420,7 @@ scThresh <- function(sc10x,feature,sub=FALSE){
thresh <-list()
cutoff.l <- list()
cutoff.h <- list()
thresh_methods <- c("IJDefault","Huang","Huang2","IsoData","Li","Mean","MinErrorI","Moments","Otsu","Percentile","RenyiEntropy","Shanbhag","Triangle")#,"Intermodes"
thresh_methods <- c("IJDefault","Huang","Huang2","Li","Mean","MinErrorI","Moments","Otsu","Percentile","RenyiEntropy","Shanbhag","Triangle")#,"Intermodes","IsoData"
for (i in names(sc10x)){
scale[[i]] <- data.frame(Score=sc10x[[i]][[feature]])
colnames(scale[[i]]) <- "Score"
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment