Commits · 1968a2e5d8abd7d969c6ae78aa095801813d91c1 · BICF / Astrocyte / rnaseq

Apr 09, 2020
- update from clinseq;move submodule · 1968a2e5
  Brandi Cantarel authored 5 years ago
  
  1968a2e5
Oct 21, 2019
- update stringtie · b2fdf539
  Brandi Cantarel authored 5 years ago
  
  publish_0.5.12
  
  b2fdf539
Aug 28, 2019
- Merge branch '18-ErrorStratagy' into 'master' · 75e3b284
  Venkat Malladi authored 5 years ago
```
add in error strategy

Closes #18

See merge request !8
```
  75e3b284
Aug 27, 2019
- add in error strategy · 7ff15f77
  Jeremy Mathews authored 5 years ago
  
  7ff15f77
Jul 08, 2019
- Merge branch '15-CheckInputFiles' into 'master' · 7c2ae90f
  Brandi Cantarel authored 5 years ago
```
Resolve "Check file inputs"

Closes #15 and #16

See merge request !7
```
  7c2ae90f
Jun 27, 2019
- Change path for geneset mouse in gitlab-ci.yml file · 888e1ee4
  Jeremy Mathews authored 5 years ago
  
  888e1ee4
- Fix check design file to not die · 468ff7a8
  Jeremy Mathews authored 5 years ago
  
  468ff7a8
Jun 20, 2019
- Merge branch 'master' into 15-CheckInputFiles · 87bd5bfe
  Jeremy Mathews authored 5 years ago
  
  87bd5bfe
- Fix process scripts v4 · bcdf5ef4
  Jeremy Mathews authored 5 years ago
  
  bcdf5ef4
- process scripts v3 · 2a0fbe4b
  Jeremy Mathews authored 5 years ago
  
  2a0fbe4b
- process scripts v3 · 300179f9
  Jeremy Mathews authored 5 years ago
  
  300179f9
- Fix process scripts issue v2 · e78d8119
  Jeremy Mathews authored 5 years ago
  
  e78d8119
- Fix process scripts issue v2 · 8c3fdfe0
  Jeremy Mathews authored 5 years ago
  
  8c3fdfe0
- Fix process scripts issue · 253e634d
  Jeremy Mathews authored 5 years ago
  
  253e634d
- File Name Check · e7ad35bc
  Jeremy Mathews authored 5 years ago
  
  e7ad35bc
Jun 17, 2019
- Test File Input - Process Error · 3caba697
  Jeremy Mathews authored 5 years ago
  
  3caba697
Jun 12, 2019
- Check Input Fastq Files · 5fc25b2c
  Jeremy Mathews authored 5 years ago
  
  5fc25b2c
Jun 11, 2019
- Merge branch '14-CI' into 'master' · cc35440c
  Brandi Cantarel authored 5 years ago
```
Resolve "Fix CI"

Closes #14

See merge request !6
```
  cc35440c
- fix CI yml · 2b7402e8
  Jeremy Mathews authored 5 years ago
  
  2b7402e8
- Fix CI · 5058b6cb
  Jeremy Mathews authored 5 years ago
  
  5058b6cb
May 30, 2019
- update dea.R round counts · 55b54dc6
  Brandi Cantarel authored 5 years ago
  
  publish_0.5.11
  
  55b54dc6
May 22, 2019
- Merge branch 'master' of git.biohpc.swmed.edu:BICF/Astrocyte/rnaseq · 870eff5e
  Brandi Cantarel authored 5 years ago
  
  publish_0.5.10
  
  870eff5e
- update starfusion and rnaseqalign.sh · 925c4582
  Brandi Cantarel authored 5 years ago
  
  925c4582
May 03, 2019
- Update .gitlab-ci.yml · 0e3599b7
  Brandi Cantarel authored 6 years ago
  
  0e3599b7
May 02, 2019
- adding new trinity · 88e1f22f
  Brandi Cantarel authored 6 years ago
  
  publish_0.5.9
  
  88e1f22f
- deleting dedundant code · 10a9e70c
  Brandi Cantarel authored 6 years ago
  
  publish_0.5.8
  
  10a9e70c
- Merge branch '8_documentation' into 'master' · d33d1b65
  Brandi Cantarel authored 6 years ago
```
documentation update on design file explanation

See merge request !5
```
  d33d1b65
Apr 26, 2019
- Merge branch '11-deafix_heatmap' into 'master' · 728e7bdd
  Venkat Malladi authored 6 years ago
```
updated submodules process_scripts

Closes #11

See merge request !4
```
  728e7bdd
Apr 19, 2019
- updated submodules process_scripts · f45dea2b
  Holly Ruess authored 6 years ago
  
  f45dea2b
Feb 12, 2019
- update skip dea · a1c370ff
  Brandi Cantarel authored 6 years ago
  
  publish_0.5.7
  
  a1c370ff
- added starfusion update · bb6e7948
  Brandi Cantarel authored 6 years ago
  
  bb6e7948
- added -d option stat anal · 6cb3c3c0
  Brandi Cantarel authored 6 years ago
  
  6cb3c3c0
Feb 07, 2019
- bg.rda -> *.rda · f42c462e
  Brandi Cantarel authored 6 years ago
  
  publish_0.5.6
  
  f42c462e
Feb 02, 2019
- update statanal into bash · d3570757
  Brandi Cantarel authored 6 years ago
  
  publish_0.5.5
  
  d3570757
Feb 01, 2019
- update shiny code, process scripts · 422f4fa1
  Brandi Cantarel authored 6 years ago
  
  publish_0.5.4
  
  422f4fa1
Jan 24, 2019
- Merge branch 'master' of git.biohpc.swmed.edu:BICF/Astrocyte/rnaseq · 5a4a99e9
  Brandi Cantarel authored 6 years ago
  
  5a4a99e9
- update fpkm · 34753c68
  Brandi Cantarel authored 6 years ago
  
  publish_0.5.3
  
  34753c68
Nov 19, 2018
- Merge branch 'shiny_update' into 'master' · 712d035d
  Brandi Cantarel authored 6 years ago
```
Shiny update

Closes #3

See merge request BICF/Astrocyte/rnaseq!1
```
  712d035d
- Merge branch 'master' into 'shiny_update' · 34bd6ead
  Brandi Cantarel authored 6 years ago
```
# Conflicts:
#   workflow/scripts/dea.R
```
  34bd6ead
Nov 12, 2018
- missing execute code · 568d7183
  Brandi Cantarel authored 6 years ago
  
  568d7183