GitLab

BioHPC Singularity tree with non-core patches

Low-frequency small variants and large deletions detection from mitochondrial DNA deep sequencing experiments.

An R program to visualize, normalize, and analyze -omics data such as those from microarray, metabolomics and proteomics experiments. Data are supplied as a list or table along with parameter settings, all in an Excel file.

Data analysis pipeline for preprocessing and reconstruction of data acquired on the iThera MSOT InVision 256-TF imaging device.

This is a set of python and R routines for converting imaging and mask information to radiomic features and perform simple classification task.

Contains various scripts used for all data analysis in Bacon_et_al_Mol_Cell_2020.