Commits · f313623232a28864535f9aa84fad6129fed13830 · GUDMAP_RBK / RNA-seq · GitLab

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Dec 28, 2020
- Try renaming qc rid variable in upload qc ci unit · f3136232
  Gervaise Henry authored 4 years ago
  
  f3136232
- Fix sed in uploadQC CI unit · 6372ae6e
  Gervaise Henry authored 4 years ago
  
  6372ae6e
- Send delete entry script to upload qc process · 4e976b0e
  Gervaise Henry authored 4 years ago
  
  4e976b0e
- Update filenames to new convention · 58b6ce0e
  Gervaise Henry authored 4 years ago
  
  58b6ce0e
Dec 27, 2020
- Fix study rid in upload process file ci unit test · b3a65d91
  Gervaise Henry authored 4 years ago
  
  b3a65d91
- Fix study rid in upload process file ci unit test · df4faf8d
  Gervaise Henry authored 4 years ago
  
  df4faf8d
- Fix upload execution run unique exist check · d35b3d62
  Gervaise Henry authored 4 years ago
  
  d35b3d62
Dec 17, 2020
- Fix CI uploadQC · 2f23de58
  Gervaise Henry authored 4 years ago
  
  2f23de58
- Fix ci uploadQC · b05be1ee
  Gervaise Henry authored 4 years ago
  
  b05be1ee
- Try excaping sed characters · a9d6c83a
  Gervaise Henry authored 4 years ago
  
  a9d6c83a
- Fix ci execution run duplicate · f6d7507f
  Gervaise Henry authored 4 years ago
  
  f6d7507f
- Use staging execution run rid in ci · a7da9606
  Gervaise Henry authored 4 years ago
  
  a7da9606
- Use staging workgenome for CI uouploadExecutionRun · cd227a07
  Gervaise Henry authored 4 years ago
  
  cd227a07
- Use staging workflow RID for CI uouploadExecutionRun · 0208816d
  Gervaise Henry authored 4 years ago
  
  0208816d
- Use staging RIDs for CI uploadExecutionRun · 9f49ef73
  Gervaise Henry authored 4 years ago
  
  9f49ef73
- Fix countData · 4868d07b
  Gervaise Henry authored 4 years ago
  
  4868d07b
- Use staging for CI execution run · 2d5c722f
  Gervaise Henry authored 4 years ago
  
  2d5c722f
- Use staging for CI uploadQC · 025d505b
  Gervaise Henry authored 4 years ago
  
  025d505b
- Try and fix CI countData · 8ae1644d
  Gervaise Henry authored 4 years ago
  
  8ae1644d
- Use staging for CI uploadExecutionRun · cede66a7
  Gervaise Henry authored 4 years ago
  
  cede66a7
- Change process output bag name to uploadProcessedFiles · b08a7fc5
  Gervaise Henry authored 4 years ago
  
  b08a7fc5
- Use staging for CI uploadInputBag · fb542ca3
  Gervaise Henry authored 4 years ago
  
  fb542ca3
- Fix CI cookie extraction to use staging · 9e42fea7
  Gervaise Henry authored 4 years ago
  
  9e42fea7
- Fix bag fetch name for test · a7af3936
  Gervaise Henry authored 4 years ago
  
  a7af3936
- Fix convert gene symbol script to use new countTable name · cdd32cb3
  Gervaise Henry authored 4 years ago
  
  cdd32cb3
- Fix CI unit test for getData · cf1d1688
  Gervaise Henry authored 4 years ago
  
  cf1d1688
- Update replicate bdbag export config name · 17962772
  Gervaise Henry authored 4 years ago
  
  17962772
- Check for old processed files and delete catalog entry · e09c1872
  Gervaise Henry authored 4 years ago
  
  e09c1872
- Check for old mRNA QC and delete catalog entry · 3aa23f2a
  Gervaise Henry authored 4 years ago
  
  3aa23f2a
- Change Workflow name · 1e6c14ae
  Gervaise Henry authored 4 years ago
  
  1e6c14ae
- Prep for version 0.1.0_indev · e8d478de
  Gervaise Henry authored 4 years ago
  
  e8d478de
- Change processed file ouputs to use _ as separator for custom txt · a6562099
  Gervaise Henry authored 4 years ago
  
  a6562099
- Add date to input/output bag · b0eb119b
  Gervaise Henry authored 4 years ago
  
  b0eb119b
- Change hatrac path upload for input/output bags · 1bdfd212
  Gervaise Henry authored 4 years ago
  
  1bdfd212
- Merge branch '75-no.upload' into '11-deriva.upload' · 10cc87d9
  Gervaise Henry authored 4 years ago
```
Resolve "Add an option to not upload"

See merge request !54
```
  10cc87d9
- Start changing model · 8792bf4b
  Gervaise Henry authored 4 years ago
  
  8792bf4b
Dec 14, 2020
- Debug process file deriva upload & no retry for integration · 04536845
  Gervaise Henry authored 4 years ago
  
  04536845
- Update docs · 0211d123
  Gervaise Henry authored 4 years ago
  
  0211d123
- Do no upload override CI integration · 6c15c28c
  Gervaise Henry authored 4 years ago
  
  6c15c28c
- Use optional upload for output bag creation · 0eab4834
  Gervaise Henry authored 4 years ago
  
  0eab4834