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Commit b05be1ee authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Fix ci uploadQC

parent a9d6c83a
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2 merge requests!58Develop,!53Resolve "process_derivaUpload"
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in 1 minute and 43 seconds
......@@ -333,7 +333,7 @@ uploadQC:
if [ "${exist}" != "[]" ]; then
rids=$(echo ${exist} | grep -o '\"RID\":\".\{7\}' | sed 's/^.\{7\}\/\/')
for rid in ${rids}; do
singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' python3 ./workflow/scripts/deleteEntry.py -r ${rid} -t mRNA_QC -o $staging.gudmap.org -c ${cookie} &&
singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' python3 ./workflow/scripts/deleteEntry.py -r ${rid} -t mRNA_QC -o staging.gudmap.org -c ${cookie} &&
echo old mRNA QC RID deleted - ${rid}
done
echo all old mRNA QC RIDs deleted
......
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