Commits · 83a28a40f5e97629e780bc6900b65ac8b91bb645 · GUDMAP_RBK / RNA-seq

Jan 04, 2021
- Add double excape to new line in fail · 83a28a40
  Gervaise Henry authored 4 years ago
  
  83a28a40
- Add double excape to new line in fail · 1cf16a8f
  Gervaise Henry authored 4 years ago
  
  1cf16a8f
- Fix fail lint · 49be4123
  Gervaise Henry authored 4 years ago
  
  49be4123
- Fix fail if lint · 3ad21a40
  Gervaise Henry authored 4 years ago
  
  3ad21a40
- Update the pipeline error format · 3bfab006
  Gervaise Henry authored 4 years ago
  
  3bfab006
- Fix fail execution run condition · 1867a815
  Gervaise Henry authored 4 years ago
  
  1867a815
- Fix fail execution run condition · 756ad35e
  Gervaise Henry authored 4 years ago
  
  756ad35e
- Make separate process for failing execution run · 6c9ef597
  Gervaise Henry authored 4 years ago
  
  6c9ef597
- Fix bash int if comparison for fastq number check · 992f9c60
  Gervaise Henry authored 4 years ago
  
  992f9c60
- Try and fix error finalize execution run · dc3c7ff4
  Gervaise Henry authored 4 years ago
  
  dc3c7ff4
- Try and fix error finalize execution run · 20fc2bf0
  Gervaise Henry authored 4 years ago
  
  20fc2bf0
- Try and fix error finalize execution run · e5325a56
  Gervaise Henry authored 4 years ago
  
  e5325a56
- Add check for number of fastqs · 7148b6f2
  Gervaise Henry authored 4 years ago
  
  7148b6f2
- Update test execution run rid for ci · c3c32ba8
  Gervaise Henry authored 4 years ago
  
  c3c32ba8
- Update test execution run rid for ci · 2acecec8
  Gervaise Henry authored 4 years ago
  
  2acecec8
- Update upload test params for ci · 70fd9253
  Gervaise Henry authored 4 years ago
  
  70fd9253
- Use non spike for CI ref tests · 0e1ef7f7
  Gervaise Henry authored 4 years ago
  
  0e1ef7f7
- Update references in CI · 683332a9
  Gervaise Henry authored 4 years ago
  
  683332a9
- Give split study full path to credentials · dc85dfdd
  Gervaise Henry authored 4 years ago
  
  dc85dfdd
- Update test data creation ref location · a48b62b2
  Gervaise Henry authored 4 years ago
  
  a48b62b2
- Update split study bash script · 60ca9dae
  Gervaise Henry authored 4 years ago
  
  60ca9dae
- Update split study py script name · 77fb7bce
  Gervaise Henry authored 4 years ago
  
  77fb7bce
- Update test data creation · 6810c5c4
  Gervaise Henry authored 4 years ago
  
  6810c5c4
- Update gtf fna location in ci · 6a64dc08
  Gervaise Henry authored 4 years ago
  
  6a64dc08
- Update bed location in ci · 6ee513fe
  Gervaise Henry authored 4 years ago
  
  6ee513fe
- Update ref versions for ci · b43ce396
  Gervaise Henry authored 4 years ago
  
  b43ce396
- Fix tin by chromosome · 0c347440
  Gervaise Henry authored 4 years ago
  
  0c347440
Jan 03, 2021
- Update changelog · c4e91e62
  Gervaise Henry authored 4 years ago
  
  c4e91e62
- Update changelog · e7d917ee
  Gervaise Henry authored 4 years ago
  
  e7d917ee
- Add finalize execution run and add new references using bag · 57834f48
  Gervaise Henry authored 4 years ago
  
  57834f48
Dec 30, 2020
- Upload se and pe staging integration ci tests · beecb815
  Gervaise Henry authored 4 years ago
  
  beecb815
- Merge branch '89-badges' into 'develop' · bf8af308
  Gervaise Henry authored 4 years ago
```
Resolve "Add tool version badges"

Closes #88 and #89

See merge request !55
```
  bf8af308
- Remove dev flag for integration tests · c90de001
  Gervaise Henry authored 4 years ago
  
  c90de001
- Update default running values · d1192a5e
  Gervaise Henry authored 4 years ago
  
  d1192a5e
- Change all integration tests to use staging · a50b5687
  Gervaise Henry authored 4 years ago
  
  a50b5687
- Replace only master dev tag for badge ci · 65516c14
  Gervaise Henry authored 4 years ago
  
  65516c14
- Change color of count badges · 64d14d17
  Gervaise Henry authored 4 years ago
  
  64d14d17
- Remove extra badge build step · 96765eed
  Gervaise Henry authored 4 years ago
  
  96765eed
- Add badges for replicate counts · fb5a2605
  Gervaise Henry authored 4 years ago
  
  fb5a2605
- Fix R version fetch for badge · 6c6deb81
  Gervaise Henry authored 4 years ago
  
  6c6deb81