Commits · 21a1b44a9f10df3484a752335b34f465b4b085a4 · GUDMAP_RBK / RNA-seq

Jul 16, 2021
- Changed the spelling of inferred. · 21a1b44a
  Venkat Malladi authored 3 years ago
  
  21a1b44a
Jul 05, 2021
- Merge branch '129-Fix_FastQ_Error' into 'develop' · bb1e0848
  Gervaise Henry authored 3 years ago
```
Update rna-seq.nf

Closes #129

See merge request !88
```
  bb1e0848
- Reverted version in nextflow.config to '2.0.0' · 64fa9678
  Jon Gesell authored 3 years ago
  
  64fa9678
- Corrected missing escape character. · 5b271a2e
  Jon Gesell authored 3 years ago
  
  5b271a2e
- Updated CHANGELOG.md and nexflot.config version numbers to 2.x.x_indev · 303f7ade
  Jon Gesell authored 3 years ago
  
  303f7ade
- Updated to include changes with issue #129 · de6a8665
  Jonathan Gesell authored 3 years ago
  
  de6a8665
- Update rna-seq.nf · 03fdde8f
  Jon Gesell authored 3 years ago
```
Changed the requested line in the scripts section of rna-seq.nf
```
  03fdde8f
May 06, 2021
- Add container for new process · 9690aab3
  Gervaise Henry authored 3 years ago
  
  9690aab3
- Add new process to configs · 8d80de50
  Gervaise Henry authored 3 years ago
  
  8d80de50
- Fix new pre fail · 5c11e089
  Gervaise Henry authored 3 years ago
  
  5c11e089
- Add new fail pre ex run for seqwho · e5783b29
  Gervaise Henry authored 3 years ago
  
  e5783b29
- Change spike from infer to meta for uploadExecutionRun · aaac13e4
  Gervaise Henry authored 3 years ago
  
  aaac13e4
Apr 22, 2021
- Fix fail pre ex run dependency on infferd meta · a35b8fe2
  Gervaise Henry authored 3 years ago
  
  a35b8fe2
Apr 20, 2021
- Fix seqwho errors · f9f3d1ea
  Gervaise Henry authored 3 years ago
  
  f9f3d1ea
Apr 13, 2021
- Fix failPreExecutionRun error collection · c0e6c659
  Gervaise Henry authored 3 years ago
  
  c0e6c659
- Fix fetch fastq count · 96fc2b71
  Gervaise Henry authored 3 years ago
  
  96fc2b71
Apr 12, 2021
- Use v2.0.0 for aws env test · 0d36671f
  Gervaise Henry authored 3 years ago
  
  0d36671f
- Remove local executor from aws config · 3add27fa
  Gervaise Henry authored 3 years ago
  
  3add27fa
- Update aws resources · f9e50ab2
  Gervaise Henry authored 3 years ago
  
  f9e50ab2
- Replace track · 9b65a0ea
  Gervaise Henry authored 3 years ago
  
  9b65a0ea
- Temporarily change aws env test to use dev · 4037ad2c
  Gervaise Henry authored 3 years ago
  
  4037ad2c
- Temporarily change aws env test to use dev · 0a66b2e2
  Gervaise Henry authored 3 years ago
  
  0a66b2e2
- Replace track · 57824464
  Gervaise Henry authored 3 years ago
  
  57824464
- Remove track process · c530d874
  Gervaise Henry authored 3 years ago
  
  c530d874
- Change aws queue to priority · f61893a7
  Gervaise Henry authored 3 years ago
  
  f61893a7
- Remove version from aws job · 90560c1c
  Gervaise Henry authored 3 years ago
  
  90560c1c
- Add version to aws job definition · 68876b78
  Gervaise Henry authored 3 years ago
  
  68876b78
- Fix aws status check conditional · 4d0954c1
  Gervaise Henry authored 3 years ago
  
  4d0954c1
- Fix aws status check conditional · 87097361
  Gervaise Henry authored 3 years ago
  
  87097361
- Shorten aws status check · ff3c5146
  Gervaise Henry authored 3 years ago
  
  ff3c5146
Mar 30, 2021
- Move fastq count up and remove report from aws ci · 8a2f76ab
  Gervaise Henry authored 4 years ago
  
  8a2f76ab
Mar 21, 2021
- Merge branch 'master' into 'develop' · b88a78cb
  Gervaise Henry authored 4 years ago
```
Hardwire pipeline version for env tests

See merge request !80
```
  b88a78cb
- Hardwire pipeline version for env tests · aa0103d0
  Gervaise Henry authored 4 years ago
  
  aa0103d0
- Merge branch 'master' into 'develop' · 2d79f649
  Gervaise Henry authored 4 years ago
```
Master

See merge request !79
```
  2d79f649
- Split aws exports · 56f97599
  Gervaise Henry authored 4 years ago
  
  56f97599
- Put aws ci exports on same line · 7c31f438
  Gervaise Henry authored 4 years ago
  
  7c31f438
- Use base singularity for env latest get · 00eb7f47
  Gervaise Henry authored 4 years ago
  
  00eb7f47
- Update minimum nextflow version · 023e4484
  Gervaise Henry authored 4 years ago
  
  023e4484
- Merge branch 'master' into 'develop' · fb4176a4
  Gervaise Henry authored 4 years ago
```
Master

See merge request !78
```
  fb4176a4
- Resolve merge · debadf08
  Gervaise Henry authored 4 years ago
  
  debadf08