Commits · 04e986c05bb8e6edc2a2ff027d64ccff38185752 · GUDMAP_RBK / RNA-seq · GitLab

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Jan 04, 2021
- Fix variable name in fail · 04e986c0
  Gervaise Henry authored 4 years ago
  
  04e986c0
- Double excape quote on error detail · a922ac5f
  Gervaise Henry authored 4 years ago
  
  a922ac5f
- Fix elif then in fail · 179ed6f2
  Gervaise Henry authored 4 years ago
  
  179ed6f2
- Add double excape to new line in fail · 8498982f
  Gervaise Henry authored 4 years ago
  
  8498982f
- Add double excape to new line in fail · 83a28a40
  Gervaise Henry authored 4 years ago
  
  83a28a40
- Add double excape to new line in fail · 1cf16a8f
  Gervaise Henry authored 4 years ago
  
  1cf16a8f
- Fix fail lint · 49be4123
  Gervaise Henry authored 4 years ago
  
  49be4123
- Fix fail if lint · 3ad21a40
  Gervaise Henry authored 4 years ago
  
  3ad21a40
- Update the pipeline error format · 3bfab006
  Gervaise Henry authored 4 years ago
  
  3bfab006
- Fix fail execution run condition · 1867a815
  Gervaise Henry authored 4 years ago
  
  1867a815
- Fix fail execution run condition · 756ad35e
  Gervaise Henry authored 4 years ago
  
  756ad35e
- Make separate process for failing execution run · 6c9ef597
  Gervaise Henry authored 4 years ago
  
  6c9ef597
- Fix bash int if comparison for fastq number check · 992f9c60
  Gervaise Henry authored 4 years ago
  
  992f9c60
- Try and fix error finalize execution run · dc3c7ff4
  Gervaise Henry authored 4 years ago
  
  dc3c7ff4
- Try and fix error finalize execution run · 20fc2bf0
  Gervaise Henry authored 4 years ago
  
  20fc2bf0
- Try and fix error finalize execution run · e5325a56
  Gervaise Henry authored 4 years ago
  
  e5325a56
- Add check for number of fastqs · 7148b6f2
  Gervaise Henry authored 4 years ago
  
  7148b6f2
- Give split study full path to credentials · dc85dfdd
  Gervaise Henry authored 4 years ago
  
  dc85dfdd
- Update split study bash script · 60ca9dae
  Gervaise Henry authored 4 years ago
  
  60ca9dae
- Update split study py script name · 77fb7bce
  Gervaise Henry authored 4 years ago
  
  77fb7bce
- Fix tin by chromosome · 0c347440
  Gervaise Henry authored 4 years ago
  
  0c347440
Jan 03, 2021
- Update changelog · e7d917ee
  Gervaise Henry authored 4 years ago
  
  e7d917ee
- Add finalize execution run and add new references using bag · 57834f48
  Gervaise Henry authored 4 years ago
  
  57834f48
Dec 30, 2020
- Update default running values · d1192a5e
  Gervaise Henry authored 4 years ago
  
  d1192a5e
- Change color of count badges · 64d14d17
  Gervaise Henry authored 4 years ago
  
  64d14d17
- Add badges for replicate counts · fb5a2605
  Gervaise Henry authored 4 years ago
  
  fb5a2605
- Fix R version fetch for badge · 6c6deb81
  Gervaise Henry authored 4 years ago
  
  6c6deb81
- Change tool badges to blueviolet · bdc694cd
  Gervaise Henry authored 4 years ago
  
  bdc694cd
- Fix picard version query · 08e9b7e2
  Gervaise Henry authored 4 years ago
  
  08e9b7e2
- Change tool versions to query develop because lates tag doesn't have version collecting yet · 97968a47
  Gervaise Henry authored 4 years ago
  
  97968a47
- Collect tool version badges · ec59337b
  Gervaise Henry authored 4 years ago
  
  ec59337b
- Update workflow/scripts/get_updated_badge_info.sh, .gitlab-ci.yml files · aee57c31
  Gervaise Henry authored 4 years ago
  
  aee57c31
Dec 29, 2020
- Update consistency test · 5ce63696
  Gervaise Henry authored 4 years ago
  
  5ce63696
- Use the right script for upload QC · f5c550ab
  Gervaise Henry authored 4 years ago
  
  f5c550ab
- Change python and bash scripts to new naming convention · c3053816
  Gervaise Henry authored 4 years ago
  
  c3053816
- Fix multiqc config for updated version · c6e7db5a
  Gervaise Henry authored 4 years ago
  
  c6e7db5a
- Update inputs and outputs of make feature counts ci unit test match new format · 656bd8b4
  Gervaise Henry authored 4 years ago
  
  656bd8b4
- Revert to old replicate in tests and ci · d19f4244
  Gervaise Henry authored 4 years ago
  
  d19f4244
- Change to new-new test data · 08094d2c
  Gervaise Henry authored 4 years ago
  
  08094d2c
- Update all tests with new test data rep · df3d4788
  Gervaise Henry authored 4 years ago
  
  df3d4788