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Commit f3136232 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Try renaming qc rid variable in upload qc ci unit

parent 6372ae6e
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2 merge requests!58Develop,!53Resolve "process_derivaUpload"
Pipeline #8595 canceled with stages
...@@ -338,8 +338,8 @@ uploadQC: ...@@ -338,8 +338,8 @@ uploadQC:
done done
echo all old mRNA QC RIDs deleted echo all old mRNA QC RIDs deleted
fi fi
rid=$(singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' python3 ./workflow/scripts/uploadQC.py -r 17-BTFJ -e 17-BTG4 -p "Single Read" -s forward -l 35 -w 5 -f 1 -n "This is a test mRNA QC" -o staging.gudmap.org -c ${cookie} -u F) && qcrid=$(singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' python3 ./workflow/scripts/uploadQC.py -r 17-BTFJ -e 17-BTG4 -p "Single Read" -s forward -l 35 -w 5 -f 1 -n "This is a test mRNA QC" -o staging.gudmap.org -c ${cookie} -u F) &&
echo ${rid} test mRNA QC created echo ${qcrid} test mRNA QC created
uploadProcessedFile: uploadProcessedFile:
stage: unit stage: unit
......
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