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Commit a087bb4e authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Not stop after the first 3 images

parent ef4541cb
2 merge requests!76Develop,!71Seqwho
Pipeline #9440 canceled with stages
in 5 minutes and 26 seconds
......@@ -33,7 +33,7 @@ img_cache:
stage: singularity
script:
- mkdir -p ${dir}cache/
- cat nextflow.config | grep -oP "container = \K.*" | tr -d "'" | sort | uniq | xargs -P 3 -I {} -c "singularity pull --dir ${dir} 'docker://'{} || true"
- cat nextflow.config | grep -oP "container = \K.*" | tr -d "'" | sort | uniq | xargs -P 3 -I {} bash -c "singularity pull --dir ${dir} 'docker://'{} || true"
- wait
- echo images cached
......
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