Fix if then

9c9d4191 · Gervaise Henry · 2464b2cb · 9c9d4191
Commit 9c9d4191 authored 4 years ago by Gervaise Henry
--- a/workflow/rna-seq.nf
+++ b/workflow/rna-seq.nf
@@ -345,6 +345,7 @@ process parseMetadata {

    # ganually get endness
    if [ "${fastqCount}" == "1" ]
+    then
      endsManual="se"
    else
      endsManual="pe"