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Commit 819e87c2 authored by Jonathan Gesell's avatar Jonathan Gesell
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Update .gitlab-ci.yml

parent bbaa391b
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2 merge requests!37v0.0.1,!19Resolve "process_makeBigWig"
Pipeline #5956 failed with stages
in 7 minutes and 47 seconds
......@@ -72,7 +72,7 @@ dedupData:
makeBigWig:
stage: unit
script:
- singularity run 'docker://bicf/deeptools3.3:2.0.0' bamCoverage -p `nproc` -b ./test_data/bam/small/Q-Y5JA_1M.se.sorted.deduped.bam -o ./test_data/bam/small/Q-Y5JA_1M.se.bw
- singularity run 'docker://bicf/deeptools3.3:2.0.0' bamCoverage -p `nproc` -b ./test_data/bam/small/Q-Y5JA_1M.se.sorted.deduped.bam -o Q-Y5JA_1M.se.bw
- pytest -m makeBigWig
fastqc:
......
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