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Commit 70ce7af1 authored by Gervaise Henry's avatar Gervaise Henry 🤠
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Fix fastq # test

parent fbd2da78
2 merge requests!37v0.0.1,!14Resolve "process_createManifest"
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workflow/scripts/parseMeta.py
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...@@ -25,7 +25,7 @@ def main(): ...@@ -25,7 +25,7 @@ def main():
else: else:
rep=metaFile["Replicate_RID"].unique()[0] rep=metaFile["Replicate_RID"].unique()[0]
print(rep) print(rep)
if (len(metaFile[metaFile["File_Type"] == "FastQ"].all()) > 2): if (len(metaFile[metaFile["File_Type"] == "FastQ"]) > 2):
print("There are more then 2 fastq's in the metadata: " + " ".join(metaFile[metaFile["File_Type"] == "FastQ"].RID)) print("There are more then 2 fastq's in the metadata: " + " ".join(metaFile[metaFile["File_Type"] == "FastQ"].RID))
exit(1) exit(1)
if (args.parameter == "ends"): if (args.parameter == "ends"):
......
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