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GUDMAP_RBK
RNA-seq
Commits
608bc755
Commit
608bc755
authored
4 years ago
by
Gervaise Henry
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Fix report order
parent
8c2c17a2
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2 merge requests
!37
v0.0.1
,
!33
Resolve "process_qc"
Pipeline
#6795
failed with stages
in 4 hours, 37 minutes, and 52 seconds
Changes
1
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1
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1 changed file
workflow/conf/multiqc_config.yaml
+6
-8
6 additions, 8 deletions
workflow/conf/multiqc_config.yaml
with
6 additions
and
8 deletions
workflow/conf/multiqc_config.yaml
+
6
−
8
View file @
608bc755
...
...
@@ -13,7 +13,6 @@ report_comment: >
This report has been generated by the <a href="https://doi.org/10.5281/zenodo.3625056">GUDMAP/RBK RNA-Seq Pipeline</a>
top_modules
:
-
custom_content
-
fastqc
:
name
:
'
Raw'
info
:
'
Replicate
Raw
fastq
QC
Results'
...
...
@@ -28,14 +27,15 @@ top_modules:
-
picard
:
name
:
'
Dedup'
info
:
'
Replicate
Alignement
Deduplication
QC
Results'
-
featureCounts
:
name
:
'
Count'
info
:
'
Replicate
Feature
Count
QC
Results'
-
rseqc
:
name
:
'
Inner
Distance'
info
:
'
Replicate
Paired
End
Inner
Distance
Distribution
Results'
path_filters
:
-
'
*insertSize*'
-
custom_content
-
featureCounts
:
name
:
'
Count'
info
:
'
Replicate
Feature
Count
QC
Results'
-
hisat2
:
name
:
'
Inference:
Align'
info
:
'
Inference
Alignment
(1M
downsampled
reads)
QC
Results'
...
...
@@ -49,11 +49,9 @@ top_modules:
report_section_order
:
rid
:
order
:
200
order
:
200
0
meta
:
order
:
100
tin
:
order
:
-100
order
:
1000
skip_generalstats
:
true
...
...
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