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BioHPC Singularity tree with non-core patches

Contains various scripts used for all data analysis in Bacon_et_al_Mol_Cell_2020.

Example static site using mkdocs for BioHPC GitLab pages.

The flash-community FTP project allows users to share their files with guests.

This repo is designed to provide a set of scripts that models microbial communities using generalized Lotka-Volterra equations.

Parameter exploration job runner for the BioHPC nucleus cluster.

Implementations of the Kalata filters described in D.S. O'Kelly, Y. Guo, R.P. Mason. Evaluating online filtering algorithms to enhance dynamic multispectral optoacoustic tomography, Photoacoustics (2020)