Explore projects

This project houses code from the Meeks Lab and TIBIR Whole Brain Microscopy Facility that facilitates image registration and analysis

Monolayer spatiotemporal dynamics analysis.

DeBias decouples global bias from direct interactions in co-orientation and co-localization data.

Parameter exploration job runner for the BioHPC nucleus cluster.

This project is the astrocyte project to do variant analysis with BAMs generated in the RNASeq Differential expression analysis pipeline.

This project is the astrocyte project to do variant analysis with BAMs generated in the RNASeq Differential expression analysis pipeline.

An example workflow package for the BioHPC Astrocyte workflow engine.

An example workflow package for the BioHPC Astrocyte workflow engine.

This is the conversion of the BICF RNASeq pipeline into the nextflow framework.

Ember.js sbatch script generator. Front-end only.