Explore projects
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BioHPC / pyslurm
GNU General Public License v2.0 or laterPySlurm with fixes on the 16.05.5 branch to allow use with Python 3.6+
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Strand Lab / sc-TissueMapper
MIT LicenseUpdated -
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A list of R packages/libraries required to run pipelines.
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BICF / Astrocyte / cellranger_count
MIT LicenseUpdated -
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Multiple Fisher's exact tests for differential alternative splicing detection using RNA-seq data
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Course material for machine learning course offered to UTSW community.
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Contains various scripts used for all data analysis in Bacon_et_al_Mol_Cell_2020.
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Instructions to login into BioHPC and adding SSH key to GitHub profile
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Prototype of a web page that can search through a list of genes from user input and return the associated symbols.
Can search by synonyms and symbols.
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Strand Lab / sc-TissueMapper_Pr
MIT LicenseUpdated -
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BioHPC / singularity
BSD 3-Clause "New" or "Revised" LicenseBioHPC Singularity tree with non-core patches
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BICF / Software / FMAP
OtherFunctional Mapping and Analysis Pipeline for metagenomics and metatranscriptomics studies
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BioHPC / clair-singularity
BSD 3-Clause "New" or "Revised" LicenseScan Singularity container images using a Clair server
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