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This is the code repository for the manuscript "Characterization of Demographical Histologic Diversity in Small Renal Masses with the Clear Cell Likelihood Score"

cutandrun pipeline from https://github.com/nf-core/cutandrun

R code for subsample correlation analysis as used in Thody et al. 2022.

3 month training notes/walkthrough of excersises

Generate flow-rate gradients with Fluigent microfluidic pumps.

Analysis scripts for projects related to germ cell tumors.

Notebooks and scripts provided here can be used for analyzing data files generated by Tecan and Biotek plate readers.

code for interchangeability by Nancy Obuchowski

Simple Gears to help you start your own development at UT Southwestern

This is a test repo

Files from the Advanced Concepts of Deep Learning Nanocourse

A repository for code to replicate the analysis of single cell data from female human urethra.

Transcript Analyzer is a module that aids in looking at and identifying target phrases in transcripts. There are two main files ProbTimeSeries.py and TranscriptAnalyzer.py the latter of which uses Streamlit to create an app

Journal Club for foundational machine learning topics