Explore projects

A list of R packages/libraries required to run pipelines.

Various ODE and SDE models

Instructions to login into BioHPC and adding SSH key to GitHub profile

De novo circular RNA detection from circular viral genome

Multiple Fisher's exact tests for differential alternative splicing detection using RNA-seq data

Functional Mapping and Analysis Pipeline for metagenomics and metatranscriptomics studies

Scan Singularity container images using a Clair server

An example of ATAC-seq using BioHPC Astrocyte workflow engine.

Accession Research Samples into Clarity. Creates a project based on the current month or uses existing month project if it already exists.

This project is the astrocyte project to do variant analysis with BAMs generated in the RNASeq Differential expression analysis pipeline.

DeBias decouples global bias from direct interactions in co-orientation and co-localization data.

Monolayer spatiotemporal dynamics analysis.

This project is the astrocyte project to do variant analysis with BAMs generated in the RNASeq Differential expression analysis pipeline.