Explore projects

Cooper Mellema - MSTP student Parkinson's MRI & MEG machine learning identification and classification project

An introduction to singularity

BFei's student group project placenta segmentator

AI segmentation for axial T2W MR Autosomal Dominant Polycystic Kidney Disease (https://github.com/aksg87/adpkd-segmentation-pytorch)

additional steps are necessary to build HON within UTSW due to proxy and firewalls

Move Flywheel data to box.com

FLywheel Gearification of https://gitlab.com/Michael_Paris/AutoMATiCA/

The general gene expression analysis pipeline of 10X Visium data

Program that overlays MEG dipoles onto MRI images and provides region highlighting to show where the dipoles are located.

Source codes to perform simulations of microtubule growth. McCormick and Cleary et al. 2023 (in preparation), "Interface-acting nucleotide controls polymerization dynamics at microtubule plus- and minus-ends".

Journal Club for foundational machine learning topics

Transcript Analyzer is a module that aids in looking at and identifying target phrases in transcripts. There are two main files ProbTimeSeries.py and TranscriptAnalyzer.py the latter of which uses Streamlit to create an app

A repository for code to replicate the analysis of single cell data from female human urethra.

Files from the Advanced Concepts of Deep Learning Nanocourse

This is a test repo