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This project is the astrocyte project to do variant analysis with BAMs generated in the RNASeq Differential expression analysis pipeline.
Topics: RNASeq NGSUpdated -
An example workflow package for the BioHPC Astrocyte workflow engine.
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Affiong Akpaninyang / atacseq_analysis
MIT LicenseUpdated -
Astrocyte / Workflows / Strand Lab / cellxgene
MIT LicenseAn Astrocyte workflow for interactive visualization and exploration of single cell data using CZ CELLxGENE.
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Astrocyte / Workflows / BICF / chipseq_analysis
MIT LicenseUpdated -
An Astrocyte workflow to run cellranger count on droplet-based single cell RNA data generated by 10x Genomics.
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This project is the astrocyte project to do variant analysis with BAMs generated in the RNASeq Differential expression analysis pipeline.
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A general purpose Astrocyte workflow to run quality control on single cell RNA sequencing data.
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An example workflow package for the BioHPC Astrocyte workflow engine.
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GCRB / gcrb_atacseq_web
OtherAn example of ATAC-seq using BioHPC Astrocyte workflow engine.
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Renad Ghazawi / Cell-Painting
MIT LicenseUpdated -
This is the conversion of the BICF RNASeq pipeline into the nextflow framework.
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An example workflow package for the BioHPC Astrocyte workflow engine.
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cutandrun pipeline from https://github.com/nf-core/cutandrun
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BICF / Astrocyte / atacseq_analysis
MIT LicenseUpdated