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basic useful copy-and-paste type codes

misc code specific for placenta study

Source codes to perform simulations of microtubule growth. Cleary et al. 2022, Elife, "Measurements and simulations of microtubule growth imply strong longitudinal interactions and reveal a role for GDP on the elongating end".

Files from the Advanced Concepts of Deep Learning Nanocourse

Transcript Analyzer is a module that aids in looking at and identifying target phrases in transcripts. There are two main files ProbTimeSeries.py and TranscriptAnalyzer.py the latter of which uses Streamlit to create an app

Source codes to perform simulations of microtubule growth. McCormick and Cleary et al. 2023 (in preparation), "Interface-acting nucleotide controls polymerization dynamics at microtubule plus- and minus-ends".

The flash-community FTP project allows users to share their files with guests.

tes

A vagrant box containing the setup necessary for building singularity images

Know-how, trouble-shooting, work log, and memo, etc.

This is a set of python and R routines for converting imaging and mask information to radiomic features and perform simple classification task.

This repo is designed to provide a set of scripts that models microbial communities using generalized Lotka-Volterra equations.

Simple Gears to help you start your own development at UT Southwestern