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An Astrocyte workflow to clean single cell or single nucleus RNA data of technical artifacts using the tool CellBender.

This is the conversion of the BICF RNASeq pipeline into the nextflow framework.

An example workflow package for the BioHPC Astrocyte workflow engine.

An example workflow package for the BioHPC Astrocyte workflow engine.

This project is the astrocyte project to do variant analysis with BAMs generated in the RNASeq Differential expression analysis pipeline.

This project is the astrocyte project to do variant analysis with BAMs generated in the RNASeq Differential expression analysis pipeline.

Parameter exploration job runner for the BioHPC nucleus cluster.