Commits · 8713aaa9955664c12c5656516fd8484a8a2ae518 · Strand Lab / sc-TissueMapper_Pr

Oct 15, 2018
- Merge branch 'develop' into 'master' · 8713aaa9
  Gervaise Henry authored 6 years ago
```
Merge ds_D17 from develop into master

See merge request sc-TissueMapper_Pr!4
```
  1.1.0
  
  8713aaa9
Oct 09, 2018
- Fix min st cluster size for QuSAGE · 68fdeb80
  Gervaise Henry authored 6 years ago
  
  68fdeb80
- Merge branch 'ds.D17' into 'develop' · dba99684
  Gervaise Henry authored 6 years ago
```
Merge completed D17 downsample in to develop

See merge request sc-TissueMapper_Pr!3
```
  dba99684
- Remove depreciated code · 790d56ab
  Gervaise Henry authored 6 years ago
  
  790d56ab
Oct 08, 2018
- Add rdata save to D17 downsample aggr · 751d0a65
  Gervaise Henry authored 6 years ago
  
  751d0a65
- Add D17 downsample aggrggrigate code · b326f2a7
  Gervaise Henry authored 6 years ago
  
  b326f2a7
Oct 05, 2018
- Remove low gene filter for intitial load · 2a275403
  Gervaise Henry authored 6 years ago
  
  2a275403
- Remove low end cutoff for cell with low gene content · 51a83364
  Gervaise Henry authored 6 years ago
  
  51a83364
Oct 04, 2018
- Remove other merge with NE · ec340b65
  Gervaise Henry authored 6 years ago
  
  ec340b65
- Remove other table with NE · 051baf70
  Gervaise Henry authored 6 years ago
  
  051baf70
- Remove NE highlight · b214eeea
  Gervaise Henry authored 6 years ago
  
  b214eeea
- Remove NE table · 17626741
  Gervaise Henry authored 6 years ago
  
  17626741
- Remove merge with NE which was causing error · b4031301
  Gervaise Henry authored 6 years ago
  
  b4031301
- Try and fix factor error with merge with set ident · fbd3525e
  Gervaise Henry authored 6 years ago
  
  fbd3525e
- Try to fix occational setident issue before merge with try · 6f83e665
  Gervaise Henry authored 6 years ago
  
  6f83e665
- Fix post stress res · da2d2232
  Gervaise Henry authored 6 years ago
  
  da2d2232
- Up post stress resolution to 1 · 45066098
  Gervaise Henry authored 6 years ago
  
  45066098
- Remove 384GB node · acbcd567
  Gervaise Henry authored 6 years ago
  
  acbcd567
- Remove 128GB node · bfc1c788
  Gervaise Henry authored 6 years ago
  
  bfc1c788
- Allow DS.D17 bash script to be sbatch'ed to 128BG node also · 86d0f7b9
  Gervaise Henry authored 6 years ago
  
  86d0f7b9
- Merge branch 'develop' into ds.D17 · 8e5d7033
  Gervaise Henry authored 6 years ago
  
  8e5d7033
- Make cell cycle violin and ridge plots for specific genes a try · 098fe606
  Gervaise Henry authored 6 years ago
  
  098fe606
- Merge branch 'develop' into ds.D17 · dadee431
  Gervaise Henry authored 6 years ago
  
  dadee431
- Fix downsampling in stress and ne · 17d62cb9
  Gervaise Henry authored 6 years ago
  
  17d62cb9
Oct 03, 2018
- Try to fix weird FINAL tSNE gen, double set ident · 5e152ae7
  Gervaise Henry authored 6 years ago
  
  5e152ae7
- Add bash script to run r script · 1e6e3905
  Gervaise Henry authored 6 years ago
  
  1e6e3905
Oct 02, 2018
- Add code for DS.D17 · 0b5eec53
  Gervaise Henry authored 6 years ago
  
  0b5eec53
Oct 01, 2018
- Merge branch 'develop' into 'master' · 25690b09
  Gervaise Henry authored 6 years ago
```
Merge develop into master

See merge request !2
```
  1.0.0
  
  25690b09
- Merge branch 'FACS' into 'develop' · 8ca3e573
  Gervaise Henry authored 6 years ago
```
Merge FACS into Develop

See merge request !1
```
  8ca3e573
- Fix cca hvg intersect · c88d11c4
  Gervaise Henry authored 6 years ago
  
  c88d11c4
Sep 28, 2018
- Update README.md · f372f6c0
  Gervaise Henry authored 6 years ago
  
  f372f6c0
- Add R & bash scripts for D27_FACS · e2ef9276
  Gervaise Henry authored 6 years ago
  
  e2ef9276
- Fix the name of 1 diy fig · 6663b617
  Gervaise Henry authored 6 years ago
  
  6663b617
- Fix lin subset if unknown present · 0a5e6878
  Gervaise Henry authored 6 years ago
  
  0a5e6878
- Fix lin subset if unknown present and re-tSNE St · 4e44d665
  Gervaise Henry authored 6 years ago
  
  4e44d665
- Make Lin identity with St+Unknown merge and diy figs · becb0f99
  Gervaise Henry authored 6 years ago
  
  becb0f99
- Add bash script to run D17_FACS · 361eae03
  Gervaise Henry authored 6 years ago
  
  361eae03
- Remove depreciated code · 8d2c9547
  Gervaise Henry authored 6 years ago
  
  8d2c9547
- Add code to analyze D17_FACS · 8bc6ee2f
  Gervaise Henry authored 6 years ago
  
  8bc6ee2f
Sep 25, 2018
- Fix QuSAGE x-axis and some diy cust cols · e1efc698
  Gervaise Henry authored 6 years ago
  
  e1efc698