Commit f0b20683 authored by Brandi Cantarel's avatar Brandi Cantarel
Browse files

Merge branch 'master' of git.biohpc.swmed.edu:BICF/Astrocyte/rnaseq

parents 50ed24b5 b9d31a3d
Pipeline #1651 failed with stage
in 26 seconds
......@@ -13,7 +13,7 @@ before_script:
stages:
- integration
test_human
test_human:
stage: integration
script:
- nextflow run workflow/main.nf --input test_data/ --design ${CLEAN_REPO_PATH}/test_data/design.rnaseq.txt --output ${CLEAN_REPO_PATH}/human_output
......@@ -22,7 +22,7 @@ test_human
- ${CLEAN_REPO_PATH}
expire_in: 2 days
test_mouse
test_mouse:
stage: integration
script:
- nextflow run workflow/main.nf --input test_data/ --design ${CLEAN_REPO_PATH}/test_data/mouse_se.design.txt --pairs se --fusion skip --genome /project/shared/bicf_workflow_ref/GRCm38 --markdups null --output ${CLEAN_REPO_PATH}/mouse_output
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment