Commits · c1c8d3a0c09d61157a0afcb0542701ff1e8d65cd · BICF / Astrocyte / chipseq_analysis

Jul 19, 2019
- fix biohpc.config typos and add gtf location to astrocyte params · c1c8d3a0
  Jeremy Mathews authored 5 years ago
  
  c1c8d3a0
Jul 18, 2019
- PR Checklist · 437126b7
  Jeremy Mathews authored 5 years ago
  
  437126b7
Jul 16, 2019
- Fix output from plot profile. · c9b7cbad
  Jeremy Mathews authored 5 years ago
  
  c9b7cbad
Jul 15, 2019
- add plot profile test. output to experiment QC folder · a5928f13
  Jeremy Mathews authored 5 years ago
  
  a5928f13
- Add outputs to plot profile · 69aa7720
  Jeremy Mathews authored 5 years ago
  
  69aa7720
Jul 12, 2019
- Update CHANGELOG.md · d2a67e93
  Jeremy Mathews authored 5 years ago
  
  d2a67e93
- Merge branch '58-single-rep' · 8dac2f27
  Jeremy Mathews authored 5 years ago
  
  8dac2f27
- Merge branch '29-PlotProfile' · 4a7bba6b
  Jeremy Mathews authored 5 years ago
  
  4a7bba6b
- Add Plot Profile. Add python version to multiqc. · d41309dc
  Jeremy Mathews authored 5 years ago
  
  d41309dc
Jul 11, 2019
- Merge branch 'patch-1' into 'master' · ab738147
  Venkat Malladi authored 5 years ago
```
Update references.md

See merge request !52
```
  ab738147
Jul 10, 2019
- Update indentation error · 2d5cbb2e
  Jeremy Mathews authored 5 years ago
  
  2d5cbb2e
- Merge branch '55-bugfix' into 'master' · 90e47425
  Venkat Malladi authored 5 years ago
```
Update gitignore with nextflow and update software reference test

Closes #55

See merge request !53
```
  90e47425
- Update references.md · 8a3087d5
  Jeremy Mathews authored 5 years ago
  
  8a3087d5
Jul 09, 2019
- Update gitignore with nextflow and update software reference test · 567ee0eb
  Jeremy Mathews authored 5 years ago
  
  567ee0eb
- Merge branch '55-CheckGenomeMapPeaks' into 'master' · eaeb2b1c
  Venkat Malladi authored 5 years ago
```
Issues #57 and #59 cause Spencer said today

Closes #57 and #59

See merge request !50
```
  eaeb2b1c
- Update CHANGELOG.md · bef64a12
  Jeremy Mathews authored 5 years ago
  
  bef64a12
Jul 08, 2019
- Resolve merge Conflict · b36522ca
  Jeremy Mathews authored 5 years ago
  
  b36522ca
- Update CHANGELOG.md · 97358be8
  Jeremy Mathews authored 5 years ago
  
  97358be8
Jul 03, 2019
- Issues #57 and #59 cause Spencer said today · 3992cee9
  Jeremy Mathews authored 5 years ago
  
  3992cee9
- fix indentation error · 408b01d5
  Holly Ruess authored 5 years ago
  
  408b01d5
Jul 02, 2019
- fix issue 58 single rep · 63669d43
  Holly Ruess authored 5 years ago
  
  63669d43
May 31, 2019
- Merge branch '55-CheckGenomeMapPeaks' into 'master' · aff51033
  Venkat Malladi authored 5 years ago
```
Fix fasta file refernce and add check for correct genome version

Closes #55 and #56

See merge request !49
```
  publish_1.0.6
  
  aff51033
- Update references.md to add Jermey · 8ca60229
  Venkat Malladi authored 5 years ago
  
  8ca60229
- Update LICENSE.md to include Jermey · aa78f939
  Venkat Malladi authored 5 years ago
  
  aa78f939
- Update README.md to reflect new release · e06c8035
  Venkat Malladi authored 5 years ago
  
  e06c8035
- Update CHANGELOG.md to include new additions and fixes · 9738f5d1
  Venkat Malladi authored 5 years ago
  
  9738f5d1
May 30, 2019
- Error Check Update Path Name for paired-end · ebede896
  Jeremy Mathews authored 5 years ago
  
  ebede896
May 29, 2019
- Error Check Update path name · 44edba97
  Jeremy Mathews authored 5 years ago
  
  44edba97
May 28, 2019
- 56-Error check in test_motif_search.py for non empty fa file · b127caa6
  Jeremy Mathews authored 5 years ago
  
  b127caa6
- Comment Licensing in R scripts · cb87ab30
  Jeremy Mathews authored 5 years ago
  
  cb87ab30
May 24, 2019
- 56-part a-Remove .txt from reference fasta file · 965d0dd5
  Jeremy Mathews authored 5 years ago
  
  965d0dd5
- 55-Fail Pipeline if wrong genome is selected · 730a2da3
  Jeremy Mathews authored 5 years ago
  
  730a2da3
May 17, 2019
- Merge branch '54-fix-spacing' into 'master' · 6cf95be0
  Venkat Malladi authored 5 years ago
```
Fix spacing.

Closes #54

See merge request !48
```
  6cf95be0
- Fix spacing. · 963d83e9
  Venkat Malladi authored 5 years ago
  
  963d83e9
- Merge branch '53-license' into 'master' · e74bfaa8
  Venkat Malladi authored 5 years ago
```
Resolve "Add license"

Closes #53

See merge request !47
```
  e74bfaa8
- Update Change log. · 0acf1a6b
  Venkat Malladi authored 5 years ago
  
  0acf1a6b
- Update tests to pass. · b8fbc47f
  Venkat Malladi authored 5 years ago
  
  b8fbc47f
- Add license for scripts. · 151ac16b
  Venkat Malladi authored 5 years ago
  
  151ac16b
- Add license to main.nf. · 8037f1ec
  Venkat Malladi authored 5 years ago
  
  8037f1ec
- Add in License. · 9a1711cf
  Venkat Malladi authored 5 years ago
  
  9a1711cf