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Commit b127caa6 authored by Jeremy Mathews's avatar Jeremy Mathews
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56-Error check in test_motif_search.py for non empty fa file

parent cb87ab30
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1 merge request!49Fix fasta file refernce and add check for correct genome version
Pipeline #4007 failed with stages
in 7 hours, 40 minutes, and 9 seconds
......@@ -21,7 +21,7 @@ def test_limited_peaks_singleend():
def test_motif_search_singleend():
assert os.path.exists(os.path.join(test_output_path, 'ENCSR238SGC_memechip', 'ENCSR238SGC.fa'))
assert os.path.exists(os.path.join(test_output_path, 'ENCSR238SGC_memechip', 'index.html'))
assert os.path.getsize(test_output_path + 'ENCSR238SGC.fa') > 0
@pytest.mark.singleskip_true
def test_motif_search_singleend():
......@@ -39,3 +39,4 @@ def test_limited_peaks_pairedend():
def test_motif_search_pairedend():
assert os.path.exists(os.path.join(test_output_path, 'ENCSR729LGA_memechip', 'ENCSR729LGA.fa'))
assert os.path.exists(os.path.join(test_output_path, 'ENCSR729LGA_memechip', 'index.html'))
assert os.path.getsize(test_output_path + 'ENCSR729LGA.fa') > 0
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