From b127caa672ad8462e37a0d0192b6cfd6998a3da6 Mon Sep 17 00:00:00 2001
From: Jeremy Mathews <Jeremy.Mathews@utsouthwestern.edu>
Date: Tue, 28 May 2019 09:04:37 -0500
Subject: [PATCH] 56-Error check in test_motif_search.py for non empty fa file
---
workflow/tests/test_motif_search.py | 3 ++-
1 file changed, 2 insertions(+), 1 deletion(-)
diff --git a/workflow/tests/test_motif_search.py b/workflow/tests/test_motif_search.py
index 28aec04..b66c813 100644
--- a/workflow/tests/test_motif_search.py
+++ b/workflow/tests/test_motif_search.py
@@ -21,7 +21,7 @@ def test_limited_peaks_singleend():
def test_motif_search_singleend():
assert os.path.exists(os.path.join(test_output_path, 'ENCSR238SGC_memechip', 'ENCSR238SGC.fa'))
assert os.path.exists(os.path.join(test_output_path, 'ENCSR238SGC_memechip', 'index.html'))
-
+ assert os.path.getsize(test_output_path + 'ENCSR238SGC.fa') > 0
@pytest.mark.singleskip_true
def test_motif_search_singleend():
@@ -39,3 +39,4 @@ def test_limited_peaks_pairedend():
def test_motif_search_pairedend():
assert os.path.exists(os.path.join(test_output_path, 'ENCSR729LGA_memechip', 'ENCSR729LGA.fa'))
assert os.path.exists(os.path.join(test_output_path, 'ENCSR729LGA_memechip', 'index.html'))
+ assert os.path.getsize(test_output_path + 'ENCSR729LGA.fa') > 0
--
GitLab