Commits · a95135a2637f509802b818f7d0b04850adad6f23 · BICF / Astrocyte / chipseq_analysis

May 15, 2019
- Merge branch '51-templates' into 'master' · a95135a2
  Venkat Malladi authored 5 years ago
```
Add in initial template.

Closes #51

See merge request BICF/Astrocyte/chipseq_analysis!45
```
  a95135a2
- Add in initial template. · bf32f4a9
  Venkat Malladi authored 5 years ago
  
  bf32f4a9
- Merge branch '50-change-peak-comparisons' into 'master' · 67a933e1
  Venkat Malladi authored 5 years ago
```
Resolve "Change Tests for Peak comparison to be greater than or equal to"

Closes #50

See merge request BICF/Astrocyte/chipseq_analysis!44
```
  67a933e1
- Updated to generic references with new version. · 677b037e
  Venkat Malladi authored 5 years ago
  
  677b037e
- Updated to generic references with new version. · ac7c8fff
  Venkat Malladi authored 5 years ago
  
  ac7c8fff
- Add in changelog. · e429d36a
  Venkat Malladi authored 5 years ago
  
  e429d36a
- Merge branch '48-single-control' into 'master' · 1ca6b372
  Venkat Malladi authored 5 years ago
```
updated script pool_and_psuedoreplicates

Closes #48

See merge request BICF/Astrocyte/chipseq_analysis!43
```
  1ca6b372
- Merge branch '46-astrocyte-links' into 'master' · df5a964e
  Venkat Malladi authored 5 years ago
```
Resolve "Fix Astrocyte links"

Closes #46

See merge request BICF/Astrocyte/chipseq_analysis!41
```
  df5a964e
- Update phantompeaks.md · d3df5095
  Venkat Malladi authored 5 years ago
  
  d3df5095
- Merge branch '43-motif-search-fix' into 'master' · 25925593
  Venkat Malladi authored 5 years ago
```
Add in python3 for motif serach.

Closes #43

See merge request BICF/Astrocyte/chipseq_analysis!40
```
  25925593
- Merge branch '42-astrocyte-skip-doc-fix' into 'master' · 82967aa1
  Venkat Malladi authored 5 years ago
```
Update descirption for variables.

Closes #42

See merge request BICF/Astrocyte/chipseq_analysis!39
```
  82967aa1
May 14, 2019
- Make test data more generic. · 062733a0
  Venkat Malladi authored 5 years ago
  
  062733a0
- Add in our own phantompeak tools documentation. · 9d7616be
  Venkat Malladi authored 5 years ago
  
  9d7616be
- Update descirption for variables. · 14f6a25a
  Venkat Malladi authored 5 years ago
  
  14f6a25a
- Add in python3 for motif serach. · 2c56b9c7
  Venkat Malladi authored 5 years ago
  
  2c56b9c7
- updated script pool_and_psuedoreplicates · f3bffff1
  Holly Ruess authored 5 years ago
  
  f3bffff1
May 06, 2019
- Merge branch '41-filepath-designfile' into 'master' · 6d87301c
  Venkat Malladi authored 5 years ago
```
Resolve "DesignFile path not followed"

Closes #41

See merge request !38
```
  publish_1.0.3
  
  6d87301c
- Covert back to files. · b18ced81
  Venkat Malladi authored 5 years ago
  
  b18ced81
- Fix association of file path. · cd167def
  Venkat Malladi authored 5 years ago
  
  cd167def
- Update main.nf to have file path for main.nf. · 9c53690d
  Venkat Malladi authored 5 years ago
  
  9c53690d
- Merge branch '40-astrocyte-design-file' into 'master' · 60d23c92
  Venkat Malladi authored 5 years ago
```
Fix astrocyte yml name fix.

Closes #40

See merge request BICF/Astrocyte/chipseq_analysis!37
```
  60d23c92
- Fix astrocyte yml name fix. · 8a267280
  Venkat Malladi authored 5 years ago
  
  8a267280
- Merge branch '8-update-documentation' into 'master' · 304683ef
  Venkat Malladi authored 5 years ago
```
Resolve "Update documentation"

Closes #8

See merge request !35
```
  publish_1.0.0
  
  304683ef
- Update diff peaks. · aa328cd4
  Venkat Malladi authored 5 years ago
  
  aa328cd4
May 05, 2019
- Add in authors. · d9a7f041
  Venkat Malladi authored 5 years ago
  
  d9a7f041
May 02, 2019
- Updated changes suggested by Spencer and fix pipeline error. · 41fcff0b
  Venkat Malladi authored 5 years ago
  
  41fcff0b
Apr 29, 2019
- Merge branch 'master' into '8-update-documentation' · 5f54d2ec
  Venkat Malladi authored 5 years ago
```
# Conflicts:
#   docs/index.md
```
  5f54d2ec
Apr 26, 2019
- updated documentation · f723bd56
  Holly Ruess authored 5 years ago
  
  f723bd56
- updated documentation · 8beec6cb
  Holly Ruess authored 5 years ago
  
  8beec6cb
Apr 23, 2019
- Merge branch '38-fix_bugs' into 'master' · cfdc3a98
  Venkat Malladi authored 5 years ago
```
Resolve "Missing modules"

Closes #38

See merge request !32
```
  publish_0.1.3
  
  cfdc3a98
- Fix test peak number. · 4dbedfbd
  Venkat Malladi authored 5 years ago
  
  4dbedfbd
- Fix test file error and missing modules. · 3065da66
  Venkat Malladi authored 5 years ago
  
  3065da66
Apr 22, 2019
- Merge branch '37-fix_tests' into 'master' · d7b59b36
  Venkat Malladi authored 5 years ago
```
Update tests.

Closes #37

See merge request !31
```
  publish_0.1.2
  
  d7b59b36
- Update tests. · 38e33deb
  Venkat Malladi authored 5 years ago
  
  38e33deb
- Merge branch '36-astrocyte-documentation' into 'master' · 81843f5e
  Venkat Malladi authored 5 years ago
```
Resolve "Update Astrocyte documentation and errors"

Closes #36

See merge request !30
```
  81843f5e
- Update regular variables. · 38d03ac0
  Venkat Malladi authored 5 years ago
  
  38d03ac0
- Update with doi id. · 262f7753
  Venkat Malladi authored 5 years ago
  
  262f7753
- Update design file example. · 684187fb
  Venkat Malladi authored 5 years ago
  
  684187fb
- update astrocyte to use true false. · 61a87202
  Venkat Malladi authored 5 years ago
  
  61a87202
- Merge branch '35-fix-astrocyte' into 'master' · dd5b3b59
  Venkat Malladi authored 5 years ago
```
Fix variable assignment.

Closes #35

See merge request !29
```
  publish_0.1.1
  
  dd5b3b59