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chipseq_analysis
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BICF
Astrocyte
chipseq_analysis
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684187fb
Commit
684187fb
authored
6 years ago
by
Venkat Malladi
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Update design file example.
parent
61a87202
1 merge request
!30
Resolve "Update Astrocyte documentation and errors"
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docs/design_example.csv
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SampleID,Tissue,Factor,Condition,Replicate,Peaks,bamReads,bamControl,ControlID,PeakCaller
A_1,A,H3K27AC,A,1,A_1.broadPeak,A_1.bam,A_1_input.bam,A_1_input,bed
A_2,A,H3K27AC,A,2,A_2.broadPeak,A_2.bam,A_2_input.bam,A_2_input,bed
B_1,B,H3K27AC,B,1,B_1.broadPeak,B_1.bam,B_1_input.bam,B_1_input,bed
B_2,B,H3K27AC,B,2,B_2.broadPeak,B_2.bam,B_2_input.bam,B_2_input,bed
C_1,C,H3K27AC,C,1,C_1.broadPeak,C_1.bam,C_1_input.bam,C_1_input,bed
C_2,C,H3K27AC,C,2,C_2.broadPeak,C_2.bam,C_2_input.bam,C_2_input,bed
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docs/design_example.txt
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sample_id experiment_id biosample factor treatment replicate control_id fastq_read1
A1 A tissueA H3K27AC None 1 B1 A1.fastq.gz
A2 A tissueA H3K27AC None 2 B2 A2.fastq.gz
B1 B tissueB Input None 1 B1 B1.fastq.gz
B2 A tissueB Input None 2 B2 B2.fastq.gz
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