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Commit 6772ee15 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Add seurat test data link fix to container test

parent e62bf327
2 merge requests!78Develop,!76Resolve "Generate Raw RDS file"
Pipeline #7877 failed with stages
in 14 minutes and 44 seconds
......@@ -252,7 +252,7 @@ container_seurat_test:
- master
- tags
script:
- ln -s test-data/output/* .
- ln -sfn test_data/output/* .
- singularity run 'docker://bicf/seurat:2.0.0_indev' Rscript workflow/scripts/downstream_viz.r --sample sample1 --cellrangerVersion 4.0.0
- singularity run 'docker://bicf/seurat:2.0.0_indev' bash workflow/scripts/versions_seurat.sh > version_seurat.txt
artifacts:
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