Commits · 237d576054120906ec48db0972bb92c929bc5f5b · BICF / Astrocyte / atacseq_analysis

Aug 08, 2018
- update overlap peaks. · 237d5760
  Venkat Malladi authored 6 years ago
  
  237d5760
- Fix utils. · 5af75223
  Venkat Malladi authored 6 years ago
  
  5af75223
- Remove TSS enrich. · 7aaabf2f
  Venkat Malladi authored 6 years ago
  
  7aaabf2f
Jul 31, 2018
- Fix check design. · e922500a
  Venkat Malladi authored 6 years ago
  
  e922500a
- Fix path. · 03a08e15
  Venkat Malladi authored 6 years ago
  
  03a08e15
- Fix references to libraries. · a7c12561
  Venkat Malladi authored 6 years ago
  
  a7c12561
- Add in test data. · 624918a8
  Venkat Malladi authored 6 years ago
  
  624918a8
Jul 30, 2018
- Fix singularity images. · 722a8dce
  Venkat Malladi authored 6 years ago
  
  722a8dce
Jun 29, 2018
- Fix carindal rule. · 01051c9c
  Venkat Malladi authored 6 years ago
  
  01051c9c
- Remove control in new design file creation. · 89fcee94
  Venkat Malladi authored 6 years ago
  
  89fcee94
Jun 28, 2018
- Add in option for overlap. · 28521250
  Venkat Malladi authored 6 years ago
  
  28521250
- Fix option for atac-seq. · 2050541b
  Venkat Malladi authored 6 years ago
  
  2050541b
- Fix qc variable. · ca4127fe
  Venkat Malladi authored 6 years ago
  
  ca4127fe
- Fix remove check enrichment for atacseq. · e2b9f8bd
  Venkat Malladi authored 6 years ago
  
  e2b9f8bd
- Fix call peaks singal generation for atac-seq. · e5dc0558
  Venkat Malladi authored 6 years ago
  
  e5dc0558
- Fix FS argument. · 7632f764
  Venkat Malladi authored 6 years ago
  
  7632f764
- Fix error in reference. · 028c6d22
  Venkat Malladi authored 6 years ago
  
  028c6d22
- Fix atac-seq option. · 912ddc2a
  Venkat Malladi authored 6 years ago
  
  912ddc2a
Jun 27, 2018
- Fix import of script and calling xcor. · 3f13aa68
  Venkat Malladi authored 6 years ago
  
  3f13aa68
- remove calcualting of atac control. · b8b7f3db
  Venkat Malladi authored 6 years ago
  
  b8b7f3db
- Add in atac option. · aa2320a8
  Venkat Malladi authored 6 years ago
  
  aa2320a8
- Fix location. · dc31fd37
  Venkat Malladi authored 6 years ago
  
  dc31fd37
- Fix path to simg. · 970a64e0
  Venkat Malladi authored 6 years ago
  
  970a64e0
- Fix tn5 shift. · 947dc833
  Venkat Malladi authored 6 years ago
  
  947dc833
- Fix tn5 shift. · b5b81f22
  Venkat Malladi authored 6 years ago
  
  b5b81f22
- Fix convert reads syntax tagAlign. · 9b83f01e
  Venkat Malladi authored 6 years ago
  
  9b83f01e
- Fix convert reads syntax tagAlign. · 26bd49bc
  Venkat Malladi authored 6 years ago
  
  26bd49bc
- Fix convert reads. · e0b2dbfa
  Venkat Malladi authored 6 years ago
  
  e0b2dbfa
- Fix extension. · f665a9b0
  Venkat Malladi authored 6 years ago
  
  f665a9b0
Jun 26, 2018
- Update convert reads. · f54c2d88
  Venkat Malladi authored 6 years ago
  
  f54c2d88
- Fix call. · 900be29e
  Venkat Malladi authored 6 years ago
  
  900be29e
- Fix syntax. · ae021fd7
  Venkat Malladi authored 6 years ago
  
  ae021fd7
- Fix syntax. · e4380c41
  Venkat Malladi authored 6 years ago
  
  e4380c41
- Add in options for chrM and tn5 shift. · 1115a866
  Venkat Malladi authored 6 years ago
  
  1115a866
Jun 25, 2018
- Fix process scripts. · f7e5053d
  Venkat Malladi authored 6 years ago
  
  f7e5053d
- Fix paired end. · 84d25149
  Venkat Malladi authored 6 years ago
  
  84d25149
- Fix sregistry. · 0bca3724
  Venkat Malladi authored 6 years ago
  
  0bca3724
- Add in make tss scripts for mouse. · 1ca0fc36
  Venkat Malladi authored 6 years ago
  
  1ca0fc36
- Update converstion step. · 3b063504
  Venkat Malladi authored 6 years ago
  
  3b063504
Jun 19, 2018
- remove cutoff ration. · 4d08d4ea
  Venkat Malladi authored 6 years ago
  
  4d08d4ea