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Commit 85a26a5e authored by Brandi Cantarel's avatar Brandi Cantarel
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add perl module to trim

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preproc_fastq/trimgalore.sh
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...@@ -45,7 +45,7 @@ fi ...@@ -45,7 +45,7 @@ fi
numfq=${#fqs[@]} numfq=${#fqs[@]}
source /etc/profile.d/modules.sh source /etc/profile.d/modules.sh
module load trimgalore/0.6.4 cutadapt/2.5 module load trimgalore/0.6.4 cutadapt/2.5 perl/5.28.0
if [ $numfq > 1 ] if [ $numfq > 1 ]
then then
......
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