From 85a26a5e579f3111d6869772024dead30019c161 Mon Sep 17 00:00:00 2001
From: Brandi Cantarel <brandi.cantarel@utsouthwestern.edu>
Date: Tue, 30 Jun 2020 20:25:59 -0500
Subject: [PATCH] add perl module to trim

---
 preproc_fastq/trimgalore.sh | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/preproc_fastq/trimgalore.sh b/preproc_fastq/trimgalore.sh
index 8bd5613..dcb2752 100644
--- a/preproc_fastq/trimgalore.sh
+++ b/preproc_fastq/trimgalore.sh
@@ -45,7 +45,7 @@ fi
 numfq=${#fqs[@]}
 
 source /etc/profile.d/modules.sh
-module load trimgalore/0.6.4 cutadapt/2.5
+module load trimgalore/0.6.4 cutadapt/2.5 perl/5.28.0 
 
 if [ $numfq > 1 ]
 then
-- 
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