add perl module to trim

85a26a5e · Brandi Cantarel · e0d3cd9b · 85a26a5e
Commit 85a26a5e authored 4 years ago by Brandi Cantarel
--- a/preproc_fastq/trimgalore.sh
+++ b/preproc_fastq/trimgalore.sh
@@ -45,7 +45,7 @@ fi
 numfq=${#fqs[@]}

 source /etc/profile.d/modules.sh
-module load trimgalore/0.6.4 cutadapt/2.5
+module load trimgalore/0.6.4 cutadapt/2.5 perl/5.28.0 

 if [ $numfq > 1 ]
 then