Commits · 6961db253f26b1d3052581f688276a739bce27d0 · GUDMAP_RBK / RNA-seq

Jan 28, 2021
- Update version to 2.0.0rc01 · 6961db25
  Gervaise Henry authored 4 years ago
  
  6961db25
- Add multiqc html to ci artifacts for override tests · 8859d7e9
  Gervaise Henry authored 4 years ago
  
  8859d7e9
- Try excaping tabs for metadata override for report · b1cdf286
  Gervaise Henry authored 4 years ago
  
  b1cdf286
- Update DAG · a7d4aa13
  Gervaise Henry authored 4 years ago
  
  a7d4aa13
- Fix metadata echo · 329dc950
  Gervaise Henry authored 4 years ago
  
  329dc950
- Fix spike override test · 63fbe5e4
  Gervaise Henry authored 4 years ago
  
  63fbe5e4
Jan 27, 2021
- Change replicates for metadata overrides · 2ddefb95
  Gervaise Henry authored 4 years ago
  
  2ddefb95
- Fix stranded override · 04c81525
  Gervaise Henry authored 4 years ago
  
  04c81525
- Update reps used for override metadata · 6e617062
  Gervaise Henry authored 4 years ago
  
  6e617062
- Fix aggrQC if brackets · 8a1299d4
  Gervaise Henry authored 4 years ago
  
  8a1299d4
- Fix params · 502328a7
  Gervaise Henry authored 4 years ago
  
  502328a7
- Make tracking upload option · df96927b
  Gervaise Henry authored 4 years ago
  
  df96927b
- Update pytest to utilize params · 1d912493
  Gervaise Henry authored 4 years ago
  
  1d912493
- Fix stranded variable · 09dd7af3
  Gervaise Henry authored 4 years ago
  
  09dd7af3
- Update pytests · a32879db
  Gervaise Henry authored 4 years ago
  
  a32879db
Jan 26, 2021
- Fix bracket · 14b8fc1d
  Gervaise Henry authored 4 years ago
  
  14b8fc1d
- Revert SE integration test and server for all integrations · 37bec34c
  Gervaise Henry authored 4 years ago
  
  37bec34c
- Change replicate for SE integration · 349cbde4
  Gervaise Henry authored 4 years ago
  
  349cbde4
- Fix echo line · 4f9bc352
  Gervaise Henry authored 4 years ago
  
  4f9bc352
- Remove extra quote · 6b085ad6
  Gervaise Henry authored 4 years ago
  
  6b085ad6
- Add new py tests for integration and override · ecd4e76f
  Gervaise Henry authored 4 years ago
  
  ecd4e76f
- Fix new force var names · 57529bc9
  Gervaise Henry authored 4 years ago
  
  57529bc9
- Remove unnecessary excape · a3d8f200
  Gervaise Henry authored 4 years ago
  
  a3d8f200
- Add missing excapes · e7024f45
  Gervaise Henry authored 4 years ago
  
  e7024f45
- Fix qutes to echo · 4d50fe8f
  Gervaise Henry authored 4 years ago
  
  4d50fe8f
- Add qutes to echo · c03c60c9
  Gervaise Henry authored 4 years ago
  
  c03c60c9
- Add force params for stranded and spike · 59cb654a
  Gervaise Henry authored 4 years ago
  
  59cb654a
- Double excape slash · 0511ac1a
  Gervaise Henry authored 4 years ago
  
  0511ac1a
- Excape bash vars · b390a5e5
  Gervaise Henry authored 4 years ago
  
  b390a5e5
- Update create test data with new metadata model · 42785f19
  Gervaise Henry authored 4 years ago
  
  42785f19
- Update create test data with new metadata model · b5569b5b
  Gervaise Henry authored 4 years ago
  
  b5569b5b
- URLify hatrac location for outputBag · b15b2201
  Gervaise Henry authored 4 years ago
  
  b15b2201
- Fix getRef use of new spike values · ddc9ef20
  Gervaise Henry authored 4 years ago
  
  ddc9ef20
Jan 25, 2021
- Update parseMetadata ci test · c2a7f9b0
  Gervaise Henry authored 4 years ago
  
  c2a7f9b0
- Temporarily change CI integration tests to use dev server (staging doesn't have model changes) · c4c258bf
  Gervaise Henry authored 4 years ago
  
  c4c258bf
- Change logic for uploadOutputBag · a503d1e2
  Gervaise Henry authored 4 years ago
  
  a503d1e2
- Merge data error pre-Execution run · 77410b76
  Gervaise Henry authored 4 years ago
  
  77410b76
- Add blank mRNA_QC on data fail · f4e88555
  Gervaise Henry authored 4 years ago
  
  f4e88555
- Remove unnecessary RID output parsing · 03f13a82
  Gervaise Henry authored 4 years ago
  
  03f13a82
- Convert strandedness from yes/no to t/f · a19f61d1
  Gervaise Henry authored 4 years ago
  
  a19f61d1