Commits · 60ca9dae82c7b7bc439f88bca0e392c9920d0906 · GUDMAP_RBK / RNA-seq

Jan 04, 2021
- Update split study bash script · 60ca9dae
  Gervaise Henry authored 4 years ago
  
  60ca9dae
- Update split study py script name · 77fb7bce
  Gervaise Henry authored 4 years ago
  
  77fb7bce
- Update test data creation · 6810c5c4
  Gervaise Henry authored 4 years ago
  
  6810c5c4
- Update gtf fna location in ci · 6a64dc08
  Gervaise Henry authored 4 years ago
  
  6a64dc08
- Update bed location in ci · 6ee513fe
  Gervaise Henry authored 4 years ago
  
  6ee513fe
- Update ref versions for ci · b43ce396
  Gervaise Henry authored 4 years ago
  
  b43ce396
- Fix tin by chromosome · 0c347440
  Gervaise Henry authored 4 years ago
  
  0c347440
Jan 03, 2021
- Update changelog · c4e91e62
  Gervaise Henry authored 4 years ago
  
  c4e91e62
- Update changelog · e7d917ee
  Gervaise Henry authored 4 years ago
  
  e7d917ee
- Add finalize execution run and add new references using bag · 57834f48
  Gervaise Henry authored 4 years ago
  
  57834f48
Dec 30, 2020
- Upload se and pe staging integration ci tests · beecb815
  Gervaise Henry authored 4 years ago
  
  beecb815
- Merge branch '89-badges' into 'develop' · bf8af308
  Gervaise Henry authored 4 years ago
```
Resolve "Add tool version badges"

Closes #88 and #89

See merge request !55
```
  bf8af308
- Remove dev flag for integration tests · c90de001
  Gervaise Henry authored 4 years ago
  
  c90de001
- Update default running values · d1192a5e
  Gervaise Henry authored 4 years ago
  
  d1192a5e
- Change all integration tests to use staging · a50b5687
  Gervaise Henry authored 4 years ago
  
  a50b5687
- Replace only master dev tag for badge ci · 65516c14
  Gervaise Henry authored 4 years ago
  
  65516c14
- Change color of count badges · 64d14d17
  Gervaise Henry authored 4 years ago
  
  64d14d17
- Remove extra badge build step · 96765eed
  Gervaise Henry authored 4 years ago
  
  96765eed
- Add badges for replicate counts · fb5a2605
  Gervaise Henry authored 4 years ago
  
  fb5a2605
- Fix R version fetch for badge · 6c6deb81
  Gervaise Henry authored 4 years ago
  
  6c6deb81
- Update badge locations for readme · 4e24282f
  Gervaise Henry authored 4 years ago
  
  4e24282f
- Remove redundant badges subfolder · 4b819df9
  Gervaise Henry authored 4 years ago
  
  4b819df9
- Make badges subfolder · d1e4d79d
  Gervaise Henry authored 4 years ago
  
  d1e4d79d
- Move badges to badges folder in pages · ec376d97
  Gervaise Henry authored 4 years ago
  
  ec376d97
- Fix ci lint · 803fc0e9
  Gervaise Henry authored 4 years ago
  
  803fc0e9
- Change tool badges to blueviolet · bdc694cd
  Gervaise Henry authored 4 years ago
  
  bdc694cd
- Fix picard version query · 08e9b7e2
  Gervaise Henry authored 4 years ago
  
  08e9b7e2
- Change tool versions to query develop because lates tag doesn't have version collecting yet · 97968a47
  Gervaise Henry authored 4 years ago
  
  97968a47
- Collect tool version badges · ec59337b
  Gervaise Henry authored 4 years ago
  
  ec59337b
- Fix badge script path · 3f23ba95
  Gervaise Henry authored 4 years ago
  
  3f23ba95
- Update badge script name · 8acce1bb
  Gervaise Henry authored 4 years ago
  
  8acce1bb
- Fix badge script name · d436cd5b
  Gervaise Henry authored 4 years ago
  
  d436cd5b
- Update workflow/scripts/get_updated_badge_info.sh, .gitlab-ci.yml files · aee57c31
  Gervaise Henry authored 4 years ago
  
  aee57c31
- Remove tag badges from readme · c9a00ca1
  Gervaise Henry authored 4 years ago
  
  c9a00ca1
- Merge branch '11-deriva.upload' into 'develop' · ad5bf09e
  Gervaise Henry authored 4 years ago
```
Resolve "process_derivaUpload"

Closes #24, #75, and #11

See merge request !53
```
  ad5bf09e
- Update changelog · 5e6b9051
  Gervaise Henry authored 4 years ago
  
  5e6b9051
- Merge branch 'develop' into '11-deriva.upload' · 072e7426
  Gervaise Henry authored 4 years ago
```
# Conflicts:
#   .gitlab-ci.yml
```
  072e7426
- Update README.md with version badges · 30143e2f
  Gervaise Henry authored 4 years ago
  
  30143e2f
- Check version using remote · c539a297
  Gervaise Henry authored 4 years ago
  
  c539a297
- Add singularity module to build badge before script · b6528a6f
  Gervaise Henry authored 4 years ago
  
  b6528a6f