Commits · 4d111e92cb3534c8290d3b37a6ebb1a7de857906 · GUDMAP_RBK / RNA-seq

Jan 14, 2021
- Add ambiguous species, trunkated fastq, R1/R2 mismatch to integration tests · 4d111e92
  Gervaise Henry authored 4 years ago
  
  4d111e92
Jan 09, 2021
- Add median TIN to mRNA_QC table · ac1c64c4
  Gervaise Henry authored 4 years ago
  
  ac1c64c4
- Update deriva container to 1.4:1.0.0 · 64fc509b
  Gervaise Henry authored 4 years ago
  
  64fc509b
Jan 07, 2021
- Create 2nd test input bag for bag override · 645313a7
  Gervaise Henry authored 4 years ago
  
  645313a7
Jan 06, 2021
- Make new inputBag for testing with txt fetch instead of fastq · a2cbcce1
  Gervaise Henry authored 4 years ago
  
  a2cbcce1
Jan 04, 2021
- Remove ci singulatity cache · fd646d53
  Gervaise Henry authored 4 years ago
  
  fd646d53
- Fix ci singularity cache dir · 6dd14574
  Gervaise Henry authored 4 years ago
  
  6dd14574
- Try and set singularity cache for ci · 7fa57c5e
  Gervaise Henry authored 4 years ago
  
  7fa57c5e
- Pass raw ends · 00ee468b
  Gervaise Henry authored 4 years ago
  
  00ee468b
- Update test execution run rid for ci · c3c32ba8
  Gervaise Henry authored 4 years ago
  
  c3c32ba8
- Update test execution run rid for ci · 2acecec8
  Gervaise Henry authored 4 years ago
  
  2acecec8
- Update upload test params for ci · 70fd9253
  Gervaise Henry authored 4 years ago
  
  70fd9253
- Use non spike for CI ref tests · 0e1ef7f7
  Gervaise Henry authored 4 years ago
  
  0e1ef7f7
- Update references in CI · 683332a9
  Gervaise Henry authored 4 years ago
  
  683332a9
- Update gtf fna location in ci · 6a64dc08
  Gervaise Henry authored 4 years ago
  
  6a64dc08
- Update bed location in ci · 6ee513fe
  Gervaise Henry authored 4 years ago
  
  6ee513fe
- Update ref versions for ci · b43ce396
  Gervaise Henry authored 4 years ago
  
  b43ce396
Dec 30, 2020
- Upload se and pe staging integration ci tests · beecb815
  Gervaise Henry authored 4 years ago
  
  beecb815
- Remove dev flag for integration tests · c90de001
  Gervaise Henry authored 4 years ago
  
  c90de001
- Change all integration tests to use staging · a50b5687
  Gervaise Henry authored 4 years ago
  
  a50b5687
- Replace only master dev tag for badge ci · 65516c14
  Gervaise Henry authored 4 years ago
  
  65516c14
- Remove extra badge build step · 96765eed
  Gervaise Henry authored 4 years ago
  
  96765eed
- Add badges for replicate counts · fb5a2605
  Gervaise Henry authored 4 years ago
  
  fb5a2605
- Remove redundant badges subfolder · 4b819df9
  Gervaise Henry authored 4 years ago
  
  4b819df9
- Make badges subfolder · d1e4d79d
  Gervaise Henry authored 4 years ago
  
  d1e4d79d
- Move badges to badges folder in pages · ec376d97
  Gervaise Henry authored 4 years ago
  
  ec376d97
- Fix ci lint · 803fc0e9
  Gervaise Henry authored 4 years ago
  
  803fc0e9
- Change tool badges to blueviolet · bdc694cd
  Gervaise Henry authored 4 years ago
  
  bdc694cd
- Collect tool version badges · ec59337b
  Gervaise Henry authored 4 years ago
  
  ec59337b
- Fix badge script path · 3f23ba95
  Gervaise Henry authored 4 years ago
  
  3f23ba95
- Update badge script name · 8acce1bb
  Gervaise Henry authored 4 years ago
  
  8acce1bb
- Fix badge script name · d436cd5b
  Gervaise Henry authored 4 years ago
  
  d436cd5b
- Update workflow/scripts/get_updated_badge_info.sh, .gitlab-ci.yml files · aee57c31
  Gervaise Henry authored 4 years ago
  
  aee57c31
- Add singularity module to build badge before script · b6528a6f
  Gervaise Henry authored 4 years ago
  
  b6528a6f
- Fix singularity for badges · 543f68f6
  Gervaise Henry authored 4 years ago
  
  543f68f6
- Move badge building to script · c7fa682b
  Gervaise Henry authored 4 years ago
  
  c7fa682b
- Add whole badges folder to artifact output · 79a52960
  Gervaise Henry authored 4 years ago
  
  79a52960
- Make single deploy stage · bbdbcb2d
  Gervaise Henry authored 4 years ago
  
  bbdbcb2d
- Create badges for branches · 16d1698e
  Gervaise Henry authored 4 years ago
  
  16d1698e
- Set dependecnies for pages · b714492c
  Gervaise Henry authored 4 years ago
  
  b714492c