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Commit fb226a98 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Fix align sample combine

parent f6ee4fbe
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2 merge requests!58Develop,!56Resolve "Detect error in inferMetadata for tracking"
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...@@ -701,7 +701,7 @@ process downsampleData { ...@@ -701,7 +701,7 @@ process downsampleData {
} }
// Replicate the dowsampled fastq's and attatched to the references // Replicate the dowsampled fastq's and attatched to the references
inferInput = endsManual_alignSampleData.combine(refInfer.combine(fastqs1Sample.collect().combine(fastqs2Sample.collect().combine(fastqCountError_alignSampleData.combine(val fastqReadError_alignSampleData))))) inferInput = endsManual_alignSampleData.combine(refInfer.combine(fastqs1Sample.collect().combine(fastqs2Sample.collect().combine(fastqCountError_alignSampleData.combine(fastqReadError_alignSampleData)))))
/* /*
* alignSampleData: aligns the downsampled reads to a reference database * alignSampleData: aligns the downsampled reads to a reference database
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