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Commit d51028bf authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Fix failPreExecutionRun

parent aa0103d0
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Pipeline #9695 passed with stages
in 12 minutes and 22 seconds
......@@ -2717,16 +2717,16 @@ process failPreExecutionRun {
errorDetails=\$(echo ${fastqCountError_details}"\\n")
elif [ ${fastqReadError} == true ]
then
errorDetails=\$(echo \$(errorDetails)${fastqReadError_details}"\\n")
errorDetails=\$(echo \${errorDetails}${fastqReadError_details}"\\n")
elif [ ${fastqFileError} == true ]
then
errorDetails=\$(echo \$(errorDetails)${fastqFileError_details}"\\n")
errorDetails=\$(echo \${errorDetails}${fastqFileError_details}"\\n")
elif [ ${seqtypeError} == true ]
then
errorDetails=\$(echo \$(errorDetails)${seqtypeError_details}"\\n")
errorDetails=\$(echo \${errorDetails}${seqtypeError_details}"\\n")
elif [ ${speciesError} == true ]
then
errorDetails=\$(echo \$(errorDetails)${speciesError_details}"\\n")
errorDetails=\$(echo \${errorDetails}${speciesError_details}"\\n")
fi
echo LOG: searching for workflow RID - BICF mRNA ${workflow.manifest.version} >> ${repRID}.failPreExecutionRun.log
......
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