Skip to content
Snippets Groups Projects
Commit c99ba0ab authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
Browse files

Add instructions for running from study RID

parent 158a687e
Branches
Tags
2 merge requests!37v0.0.1,!36Metadata output update
Pipeline #7834 passed with stages
in 1 hour, 16 minutes, and 57 seconds
This commit is part of merge request !36. Comments created here will be created in the context of that merge request.
Hide whitespace changes
Inline Side-by-side
Showing
with 8 additions and 2 deletions
README.md
+ 8
− 2
View file @ c99ba0ab
......@@ -58,11 +58,17 @@ FULL EXAMPLE:
nextflow run workflow/rna-seq.nf --deriva ./data/credential.json --bdbag ./data/cookies.txt --repRID Q-Y5JA
```
To run a set of replicates from study RID:
------------------------------------------
Run in repo root dir:
* `sh workflow/scripts/splitStudy.sh [studyRID]`
It will run in parallel in batches of 5 replicatesRID
[**CHANGELOG**](https://git.biohpc.swmed.edu/BICF/gudmap_rbk/rna-seq/blob/develop/CHANGELOG.md)
---
<hr>
[**CHANGELOG**](https://git.biohpc.swmed.edu/BICF/gudmap_rbk/rna-seq/blob/develop/CHANGELOG.md)
<hr>
Credits
=======
......
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment