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Commit c99049e9 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Try to not error if images already there

parent 1d711568
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2 merge requests!76Develop,!71Seqwho
Pipeline #9386 canceled with stages
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...@@ -33,7 +33,7 @@ img_cache: ...@@ -33,7 +33,7 @@ img_cache:
stage: singularity stage: singularity
script: script:
- export -p | grep SINGULARITY_CACHEDIR - export -p | grep SINGULARITY_CACHEDIR
- cat nextflow.config | grep -oP "container = \K.*" | tr -d "'" | sort | uniq | xargs -P 10 -I {} singularity pull --dir ${dir} 'docker://'{} - cat nextflow.config | grep -oP "container = \K.*" | tr -d "'" | sort | uniq | xargs -P 10 -I {} singularity pull --dir ${dir} 'docker://'{} 2>&1
collect: collect:
stage: versions stage: versions
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