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Commit bd6aab6e authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Fix input bag override

parent 656bd8b4
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2 merge requests!58Develop,!53Resolve "process_derivaUpload"
......@@ -655,7 +655,7 @@ override_inputBag:
script:
- hostname
- ulimit -a
- nextflow -q run ./workflow/rna-seq.nf --deriva ./test_data/auth/credential.json --bdbag ./test_data/auth/cookies.txt --repRID Q-Y5F6 --inputBagForce ./test_data/bag/Q-Y5F6_inputBag_20201228.zip --upload false --ci true
- nextflow -q run ./workflow/rna-seq.nf --deriva ./test_data/auth/credential.json --bdbag ./test_data/auth/cookies.txt --repRID Q-Y5F6 --inputBagForce ./test_data/bag/Q-Y5F6_inputBag.zip --upload false --ci true
- find . -type f -name "multiqc_data.json" -exec cp {} ./inputBagOverride_PE_multiqc_data.json \;
artifacts:
name: "$CI_JOB_NAME"
......
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