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Commit a70781aa authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Revert fastq unit to singularity run

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2 merge requests!37v0.0.1,!34aws.batch
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...@@ -112,7 +112,7 @@ makeBigWig: ...@@ -112,7 +112,7 @@ makeBigWig:
fastqc: fastqc:
stage: unit stage: unit
script: script:
- singularity exec 'docker://bicf/fastqc:2.0.1_indev' ./test_data/fastq/small/Q-Y5F6_1M.R1.fastq.gz -o . - singularity run 'docker://bicf/fastqc:2.0.1_indev' ./test_data/fastq/small/Q-Y5F6_1M.R1.fastq.gz -o .
- pytest -m fastqc - pytest -m fastqc
dataQC: dataQC:
......
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