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Commit 24284602 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Try singularity exec for fastqc unit test

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2 merge requests!37v0.0.1,!34aws.batch
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......@@ -112,7 +112,7 @@ makeBigWig:
fastqc:
stage: unit
script:
- singularity run 'docker://bicf/fastqc:2.0.1_indev' ./test_data/fastq/small/Q-Y5F6_1M.R1.fastq.gz -o .
- singularity exec 'docker://bicf/fastqc:2.0.1_indev' ./test_data/fastq/small/Q-Y5F6_1M.R1.fastq.gz -o .
- pytest -m fastqc
dataQC:
......
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