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Commit 9b1dd698 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Fix fail on ambiguous species

parent f59cda49
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2 merge requests!58Develop,!56Resolve "Detect error in inferMetadata for tracking"
Pipeline #8860 canceled with stages
in 3 minutes and 42 seconds
......@@ -840,7 +840,7 @@ process inferMetadata {
fi
fi
if [ !\${speciesError} ] && [ "${speciesForce}" = "" ]
if !\${speciesError} && [ "${speciesForce}" = "" ]
then
# infer experimental setting from dedup bam
echo -e "LOG: infer experimental setting from dedup bam" >> ${repRID}.inferMetadata.log
......
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